Hi,
i am trying the Moving pictures tutorial and get following error at Sequence quality control step:
Could you please advise
Traceback (most recent call last):
File "/software/Anaconda/envs/qiime2/bin/qiime", line 6, in <module>
sys.exit(q2cli.__main__.qiime())
File "/software/Anaconda/envs/qiime2/lib/python3.5/site-packages/click/core.py", line 716, in __call__
return self.main(*args, **kwargs)
File "/software/Anaconda/envs/qiime2/lib/python3.5/site-packages/click/core.py", line 696, in main
rv = self.invoke(ctx)
File "/software/Anaconda/envs/qiime2/lib/python3.5/site-packages/click/core.py", line 1060, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/software/Anaconda/envs/qiime2/lib/python3.5/site-packages/click/core.py", line 1060, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/software/Anaconda/envs/qiime2/lib/python3.5/site-packages/click/core.py", line 889, in invoke
return ctx.invoke(self.callback, **ctx.params)
File "/software/Anaconda/envs/qiime2/lib/python3.5/site-packages/click/core.py", line 534, in invoke
return callback(*args, **kwargs)
File "/software/Anaconda/envs/qiime2/lib/python3.5/site-packages/q2cli-0.0.6-py3.5.egg/q2cli/commands.py", line 210, in __call__
File "<decorator-gen-138>", line 2, in plot_qualities
File "/software/Anaconda/envs/qiime2/lib/python3.5/site-packages/qiime-2.0.6-py3.5.egg/qiime/core/callable.py", line 227, in callable_wrapper
output_types, provenance)
File "/software/Anaconda/envs/qiime2/lib/python3.5/site-packages/qiime-2.0.6-py3.5.egg/qiime/core/callable.py", line 426, in _callable_executor_
ret_val = callable(output_dir=temp_dir, **view_args)
File "/software/Anaconda/envs/qiime2/lib/python3.5/site-packages/q2_dada2-0.0.6-py3.5.egg/q2_dada2/_plot.py", line 61, in plot_qualities
File "/software/Anaconda/envs/qiime2/lib/python3.5/site-packages/q2_dada2-0.0.6-py3.5.egg/q2_dada2/_plot.py", line 29, in run_commands
File "/software/Anaconda/envs/qiime2/lib/python3.5/subprocess.py", line 708, in run
output=stdout, stderr=stderr)
subprocess.CalledProcessError: Command '['profile_quality.R', '/tmp/qiime2-archive-98n85q8x/da0c3291-332d-4670-a8eb-0ec9672c038e/data/L3S242_19_L001_R1_001.fastq.gz', '/tmp/qiime2-temp-3l0rhx7e']' returned non-zero exit status 1