Error in running q2-fmt

[macrobiome (T)]

Thanks @5cr34m, I included the "where" line previously and was advised by one of the creators of q2-fmt not to include it.

Am I interpreting weighted vs. unweighted distance matrix unifrac boxplots correctly?

Hi @macrobiome, Good! I always have to check I misunderstood how your metadata was set up. There is no issue with your donor metadata column. However you will want to add a "fake" time column. I would put a column that is called week in your metadata. Give all the tumor values 1 and leave all the intestines blank. (This is part of the tweaking this method to fix your study) Lastly remove the filtering parameter, you will need all your samples in order to run this anaysis. --…