Hello,
When I used below script to input data and got the error “An unexpected error has occurred: invalid literal for int() with base 10”.
qiime tools import
–type ‘SampleData[SequencesWithQuality]’
–input-path trimmed_seq
–input-format CasavaOneEightSingleLanePerSampleDirFmt
–output-path demux-single-end.qza
Does anyone have ideas to fix it? Thanks a lot.
Hi Kaile,
However i can see that you are trying import casava format files.
A bit more information about the fastq files in trimmed_seq folder would be helpful.
1 Like