Error code when trying to merge taxonomy and ASV data

Hello,

I am trying to create an ASV table where rows are samples and the columns are ASV's, but listed by taxonomy instead of ASV code. Something like this:

Previous posts on the forum suggested the following command to create that table:

qiime metadata tabulate
--m-input-file table.qza
--m-input-file rep-seqs.qza
--m-input-file taxonomy.qza
--o-visualization merged.qzv

However, I received the following error:

There was an issue with merging QIIME 2 Metadata: Cannot merge because there are no IDs shared across metadata objects.

Do I have the wrong command or am I missing a step somewhere in here?

Thank you for your help!

1 Like

Hi @mrplocek,

You can try this approach.

This topic was automatically closed 31 days after the last reply. New replies are no longer allowed.