https://q2-sidle.readthedocs.io/en/latest/reconstruction.html
in this page qiime sidle reconstruct-fragment-rep-seqs
--p-region WonderWoman
--i-regional-alignment there is no option --i-regional-alignment but Missing option '--i-kmer-map'.
which one is right ？ I wish the documentation was a complete example
and l am a beginner l would like to ask you some low level question
How do I set the length of kmer and trim-length such as l use 74f 315R V1-V2 length241
l have tryed use 200 and others like 316F 484R V3 168 use 130 I do not know right or wrong
An off-topic reply has been merged into an existing topic: q2-sidle Error in docs
Please keep replies on-topic in the future.