Hi @saatkinson! It looks like your barcodes and sequences files got swapped when you imported them into iowa_seqs.qza
. In other words, barcodes.fastq.gz
contains your sequences, and sequences.fastq.gz
contains your barcodes. I verified this by exporting your multiplexed data with qiime tools export
and inspecting the two .fastq.gz
files with the less
command.
Can you try re-importing your multiplexed data after you swap those filenames around?