Hello @gmdouglas ,
I hope you are well
I have a question about copy # variation in q2picrust2: In simple language, what do you mean by copy # variation? How do you get the 16S rRNA copy # for my unknown samples? I do not provide that information anywhere in the q2picrust2 command. I only provide as input: my feature table (table.qza), sequences (sequence.qza) and other parameters (nsti, mp etc.)
If you please can help me here, that will be much appreciated.