Hi,
I am merging sequence tables from different runs so I can have one ASV table to run q2-skclassify on. However, it's throwing me this error when I do merge-seqs
qiime feature-table merge-seqs --i-data ${DIR1}/rep-seqs-dada2.qza --i-data ${DIR2}/rep-seqs-dada2.qza --i-data ${DIR3}/rep-seqs-dada2.qza --i-data ${DIR4}/rep-seqs-dada2.qza --i-data ${DIR5}/rep-seqs-dada2.qza --o-merged-data ${OUTDIR}/merged-rep-seqs-dada2.qza
Error message:
File "{HOMEDIR}/anaconda3/envs/q2019.7_fresh/lib/python3.6/zipfile.py", line 1226, in _RealGetContents
raise BadZipFile("Bad magic number for central directory")
zipfile.BadZipFile: Bad magic number for central directoryThere was a problem loading ${DIR4}/rep-seqs-dada2.qza as a QIIME 2 Result:
Bad magic number for central directory
When I merge the feature tables from the same directories I don't encounter any problem. I've also tried to run dada2 again on that particular batch in case the output was corrupt but I have the same problem on merging the sequences.
I link here the seq table for reference:
If I can be helped out it would mean a lot, thank you!!