First of all I would like to thank you all for the help you give here, you’re so valueable!! I’ve found a lot of posts that really helped me, but unluckly this doesn’t seem to be enough for the newbie like me!
So here I am with my problem:
- I have some fastq files that I would like to import in qiime, in order to try the moving pitcure tutorial that I’ve only studied from the web so far.
- The tool I’m using is a jupiter notebook, and for this reason I started using the Artifact module.
- I’ve taken inspiration from - among the others - this thread and I got (I think!!) an artifact that gives me this:
<artifact: SampleData[SequencesWithQuality] uuid: e770a98c-68a8-4e42-80ac-3bb6b821fbed>
I’m a bit confused now about how to proceed. Everything I try to do on this artifact object seems to be inappropriate. For example I tried:
that turned out with the error
AttributeError: 'Artifact' object has no attribute 'per_sample_sequences'
What are the attributes available for this object? How can I access to it?
How can I get, for example, the feature table?
As I said, I would like to replicate the moving picture tutorial, or do something close to it.
Thanks in advance for the help