I have the qiime2-2022.2 installed by conda. I am trying to use ancom-bc.
I have already installed the plugin following the tutoarial.
The plug intalled is visible typing "qiime". When I use it with the example_data of the tutorial I have the erorr:
Error in library(tidyverse) : there is no package called ‘tidyverse’
The R version in 4.1. I tried to install the library:
install.packages("tidyverse",dependencies = TRUE)
ERROR: dependencies ‘rvest’, ‘xml2’ are not available for package ‘tidyverse’
installation of package ‘xml2’ had non-zero exit status
mv: cannot move '/root/miniconda3/envs/qiime2-2022.2/lib/R/library/00LOCK-xml2/00new/xml2' to '/root/miniconda3/envs/qiime2-2022.2/lib/R/library/xml2': Permission denied
Then I open a new ubuntu window an I typed:
sudo apt-get install libcurl4-openssl-dev --fix-broken
sudo apt-get install libcurl4-openssl-dev libxml2-dev
nothing changed.. here I am blocked.