Hello, I have a trouble with feature classifier with silva 132 database in qiime2 2018.8.
First, I followed this tutorial to create classifier from Silva 132 database for 16S gene.
I ran into this thread and found this post to reduce the
I am reducing the
--p-classify--chunk-size from 20000 into 10000 but still give MemoryError, then I am reducing the chunk-size into 5000 and the command give
Using the results, I am creating the taxonomy file using this plugin
qiime feature-classifier classify-sklearn, but the results only shows Archaea.
Can any body give suggestion?