Dear all, I am excited about the plugin aldex2, however, I am experiencing the next error. Could anybody help me? (qiime2-2019.7) mbp-de-isabel:~ Isa$ qiime aldex2 aldex2 --i-table /Users/Isa/Downloads/archivos/sleeve-table-final.qza --m-metadata-file /Users/Isa/Downloads/archivos/sleeve_map_final…

Hi @Imindias , Looks like aldex2 is not installed properly. My guess is that you installed q2-aldex2 but did not install aldex2 in R? Please see the installation guide here: https://library.qiime2.org/plugins/q2-aldex2/24/ Specifically you may have missed these lines or failed to successfully inst…

Thanks @Nicholas_Bokulich , yes this error should be resolved once you install the ALDEx2 package! Cheers, Dan

Dear @dgiguer and @Nicholas_Bokulich , thanks for your support. Yes, it was a problem with the installation with R. For others, what worked for me is your instructions in gitHub ggloor/q2-aldex2/blob/master/README.md # q2-aldex2 qiime2 plugin for aldex2 for differential abundance an…

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aldex2 problem with R?

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