Hello, I'm having some problems when use qiime2-2019.10 import paired end data:
error:
There was a problem importing mainfest.txt:
mainfest.txt is not a(n) PairedEndFastqManifestPhred33 file:
Found header on line 1 with the following labels: ['sample-id\tforward-absolute-filepath\treverse-absolute-filepath'], expected: ['sample-id', 'absolute-filepath', 'direction']
This is my Fastq manifest,like this manifest file,:
sample-id forward-absolute-filepath reverse-absolute-filepath
H1 /home/Project/16S/data/A01_1.fastq.gz /home/Project/16S/data/A01_2.fastq.gz
H2 /home/Project/16S/data/A04_1.fastq.gz /home/Project/16S/data/A04_2.fastq.gz
H3 /home/Project/16S/data/A021_1.fastq.gz /home/Project/16S/data/A021_2.fastq.gz
H4 /home/Project/16S/data/A08_1.fastq.gz /home/Project/16S/data/A08_2.fastq.gz
H5 /home/Project/16S/data/A084_1.fastq.gz /home/Project/16S/data/A084_2.fastq.gz
My command:
qiime tools import --type 'SampleData[PairedEndSequencesWithQuality]' \
--input-path mainfest.txt \
--input-format PairedEndFastqManifestPhred33 \
--output-path demux.qza
Thanks!