16s Nanopore dada2 and deblur failed

Hi @ibrahim,
Unfortunately nanopore data is not supported by DADA2 currently and neither is the other denoising method Deblur. This is something you might have to do outside of Qiime2, or you can stick with older methods such as OTU picking etc in which case you can use Qiime2. See here for some suggestions.

1 Like