# single-end PHRED 33 fastq manifest file for forward reads sample-id absolute-filepath direction BCH1 $pwd/demux/BCH1_S1_L001_R1_001.fastq.gz forward BCH2 $pwd/demux/BCH2_S1_L001_R1_001.fastq.gz forward BCH3 $pwd/demux/BCH3_S1_L001_R1_001.fastq.gz forward BCT1 $pwd/demux/BCT1_S1_L001_R1_001.fastq.gz forward BCT2 $pwd/demux/BCT2_S1_L001_R1_001.fastq.gz forward BCT3 $pwd/demux/BCT3_S1_L001_R1_001.fastq.gz forward BKH1 $pwd/demux/BKH1_S1_L001_R1_001.fastq.gz forward BKH2 $pwd/demux/BKH2_S1_L001_R1_001.fastq.gz forward BKH3 $pwd/demux/BKH3_S1_L001_R1_001.fastq.gz forward BNT1 $pwd/demux/BNT1_S1_L001_R1_001.fastq.gz forward BNT2 $pwd/demux/BNT2_S1_L001_R1_001.fastq.gz forward BNT3 $pwd/demux/BNT3_S1_L001_R1_001.fastq.gz forward