#SampleID BarcodeSequence LinkerPrimerSequence center_name experiment_design_description instrument_model library_construction_protocol linker pcr_primers platform run_prefix sequencing_meth target_gene target_subfragment qiita_prep_id animal_id barcodeid captive_wild collection_timestamp collector common_name corrected_species_name country dataset dna_extracted elevation group_id group_individual_id healthy host_subject_id latitude life_stage longitude ncbi_taxon_id oldsampleid physical_specimen_location physical_specimen_remaining preservative qiita_study_id sample sample_type scientific_name sex species_name taxon_id taxonomy_species Description ZU.18197.tapir AAGATCGTACTG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Mauri 18197 captive 11/11/14 Zurich Zoo South American tapir Tapirus terrestris Switzerland Zurich TRUE 193 healthy zurich.Mauri 32.84 subadult -117.25 9801 ZU.18197 UCSD FALSE none 11166 ZU.18197 fecal gut metagenome male Tapirus terrestris 749906 Tapirus terrestris ZU.18197.tapir gut sample FD.0007.bharal AAGCCGGGTCCG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 12/4/12 Montpellier Zoo Bharal Pseudois nayaur France Delsuc TRUE 193 mont.bharal.1 mont.bharal.1 unknown 32.84 adult -117.25 59542 FD.0007 UCSD FALSE none 11166 FD.0007 fecal gut metagenome unknown Pseudois nayaur 749906 Pseudois nayaur FD.0007.bharal gut sample TS.118.pangolin AAGCCTCTACGA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.118 none wild 7/29/14 Fred Delsuc Cape pangolin Manis temmincki South Africa South Africa TRUE 193 unknown TS.118 32.84 unknown -117.25 302418 TS.118 UCSD FALSE none 11166 TS.118 intestinal gut metagenome unknown Manis temmincki 749906 Manis temminckii TS.118.pangolin gut sample TS.131.steenbok AAGGGTTAGTCT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.131 none wild 7/30/14 Fred Delsuc Steenbok Raphicerus campestris South Africa South Africa TRUE 193 unknown TS.131 32.84 unknown -117.25 59544 TS.131 UCSD FALSE none 11166 TS.131 fecal gut metagenome unknown Raphicerus campestris 749906 Raphicerus campestris TS.131.steenbok gut sample TS.209.wilddog AAGTAGGAAGGA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.209 none wild 8/1/14 Fred Delsuc African wild dog Lycaon pictus South Africa South Africa TRUE 193 unknown TS.209 32.84 unknown -117.25 9622 TS.209 UCSD FALSE none 11166 TS.209 fecal gut metagenome unknown Lycaon pictus 749906 Lycaon pictus TS.209.wilddog gut sample TS.086.baboon AATAGTCGTGAC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.086 none wild 7/28/14 Fred Delsuc Chacma baboon Papio hamadryas South Africa South Africa TRUE 193 unknown TS.086 32.84 unknown -117.25 9557 TS.086 UCSD FALSE none 11166 TS.086 fecal gut metagenome unknown Papio hamadryas 749906 Papio hamadryas TS.086.baboon gut sample TS.117.pangolin AATATCGGGATC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.117 none wild 7/29/14 Fred Delsuc Cape pangolin Manis temmincki South Africa South Africa TRUE 193 unknown TS.117 32.84 unknown -117.25 302418 TS.117 UCSD FALSE none 11166 TS.117 intestinal gut metagenome unknown Manis temmincki 749906 Manis temminckii TS.117.pangolin gut sample TS.155.hartebeest AATCATTTGTAA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.155 none wild 7/30/14 Fred Delsuc Red hartebeest Alcelaphus buselaphus South Africa South Africa TRUE 193 unknown TS.155 32.84 unknown -117.25 59517 TS.155 UCSD FALSE none 11166 TS.155 fecal gut metagenome unknown Alcelaphus buselaphus 749906 Alcelaphus buselaphus TS.155.hartebeest gut sample FD.0077.eland AATCTAACAATT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 5/16/13 Montpellier Zoo Common eland Tragelaphus oryx France Delsuc TRUE 193 mont.eland.1 mont.eland.1 unknown 32.84 adult -117.25 9945 FD.0077 UCSD FALSE none 11166 FD.0077 fecal gut metagenome unknown Taurotragus oryx 749906 Taurotragus oryx FD.0077.eland gut sample ZU.18232.lemur AATCTCTATAAC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Sava 18232 captive 11/11/14 Zurich Zoo Redfronted brown lemur Eulemur rufus Switzerland Zurich TRUE 193 healthy zurich.Sava 32.84 adult -117.25 859983 ZU.18232 UCSD FALSE none 11166 ZU.18232 fecal gut metagenome female Eulemur rufus 749906 Eulemur rufus ZU.18232.lemur gut sample ZU.18195.wolf ACATCAGGTCAC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 18195 captive 11/25/14 Zurich Zoo Mongolian wolf Canis lupus Switzerland Zurich TRUE 193 healthy zurich.wolf.1 32.84 unknown -117.25 9612 ZU.18195 UCSD FALSE none 11166 ZU.18195 fecal gut metagenome unknown Canis lupus 749906 Canis lupus ZU.18195.wolf gut sample TS.200.mongoose ACCCGGATTTCG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.200 none wild 8/1/14 Fred Delsuc Cape grey mongoose Galerella pulverulenta South Africa South Africa TRUE 193 unknown TS.200 32.84 unknown -117.25 55052 TS.200 UCSD FALSE none 11166 TS.200 fecal gut metagenome unknown Galerella pulverulenta 749906 Galerella pulverulenta TS.200.mongoose gut sample FD.0071.guanaco ACCTATGGTGAA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 1/3/13 Gramat Animal Park Guanaco Lama guanicoe France Delsuc TRUE 193 gramat.guanaco.1 gramat.guanaco.1 unknown 32.84 adult -117.25 9840 FD.0071 UCSD FALSE none 11166 FD.0071 fecal gut metagenome unknown Lama guanicoe 749906 Lama guanicoe FD.0071.guanaco gut sample FD.0112.jaguar ACGCCGAGGTAG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 968000000000000 none captive 4/8/13 Toulon Zoo Jaguar Panthera onca France Delsuc TRUE 193 healthy toulon.968000000722144 32.84 adult -117.25 9690 FD.0112 UCSD FALSE none 11166 FD.0112 fecal gut metagenome male Panthera onca 749906 Panthera onca FD.0112.jaguar gut sample TS.172.impala ACGCGAACTAAT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.172 none wild 7/30/14 Fred Delsuc Impala Aepyceros melampus South Africa South Africa TRUE 193 unknown TS.172 32.84 unknown -117.25 9897 TS.172 UCSD FALSE none 11166 TS.172 fecal gut metagenome female Aepyceros melampus 749906 Aepyceros melampus TS.172.impala gut sample FD.0099.wolf ACGGCCCTGGAG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 6/15/13 Toulon Zoo Wolf Canis lupus France Delsuc TRUE 193 toulon.wolf.1 toulon.wolf.1 healthy 32.84 subadult -117.25 9612 FD.0099 UCSD FALSE none 11166 FD.0099 fecal gut metagenome female Canis lupus 749906 Canis lupus FD.0099.wolf gut sample TS.128.pangolin AGAAGGCCTTAT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.128 none wild 7/29/14 Fred Delsuc Cape pangolin Manis temmincki South Africa South Africa TRUE 193 unknown TS.128 32.84 unknown -117.25 302418 TS.128 UCSD FALSE none 11166 TS.128 intestinal gut metagenome unknown Manis temmincki 749906 Manis temminckii TS.128.pangolin gut sample FD.0083.mousedeer AGACAGTAGGAG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 5/23/13 Lille Zoo Java mousedeer Tragulus javanicus France Delsuc TRUE 193 lille.javamousedeer.1 lille.javamousedeer.1 unknown 32.84 unknown -117.25 9849 FD.0083 UCSD FALSE none 11166 FD.0083 fecal gut metagenome unknown Tragulus javanicus 749906 Tragulus javanicus FD.0083.mousedeer gut sample FD.0108.jaguar AGCACCGGTCTT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 978000000000000 none captive 4/8/13 Toulon Zoo Jaguar Panthera onca France Delsuc TRUE 193 healthy toulon.978000000809699 32.84 adult -117.25 9690 FD.0108 UCSD FALSE none 11166 FD.0108 fecal gut metagenome male Panthera onca 749906 Panthera onca FD.0108.jaguar gut sample FD.0247.capuchin AGCCAGTCATAC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 6/30/13 Sigean African Reserve Tufted capuchin Cebus apella France Delsuc TRUE 193 unknown sig.tuftedcapuchin.2 32.84 unknown -117.25 1093778 FD.0247 UCSD FALSE none 11166 FD.0247 fecal gut metagenome female Cebus apella 749906 Cebus apella FD.0247.capuchin gut sample TS.135.aardvark AGCCCGCAAAGG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.135 none wild 7/30/14 Fred Delsuc Aardvark Orycteropus afer South Africa South Africa TRUE 193 unknown TS.135 32.84 unknown -117.25 9818 TS.135 UCSD FALSE none 11166 TS.135 fecal gut metagenome unknown Orycteropus afer 749906 Orycteropus afer TS.135.aardvark gut sample TS.098.rockrabbit AGCTATGTATGG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.098 none wild 7/29/14 Fred Delsuc Red rockrabbit Pronolagus rupestris South Africa South Africa TRUE 193 unknown TS.098 32.84 unknown -117.25 42061 TS.098 UCSD FALSE none 11166 TS.098 fecal gut metagenome unknown Pronolagus rupestris 749906 Pronolagus rupestris TS.098.rockrabbit gut sample FD.0089.aardvark AGCTTCGACAGT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none wild 11/23/13 TdR Nature Reserve Aardvark Orycteropus afer South Africa Delsuc TRUE 193 tdr.aardvark.3 tdr.aardvark.3 unknown 32.84 unknown -117.25 9818 FD.0089 UCSD FALSE none 11166 FD.0089 fecal gut metagenome unknown Orycteropus afer 749906 Orycteropus afer FD.0089.aardvark gut sample TS.004.mongoose AGGAACCAGACG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.004 none wild 7/25/14 Fred Delsuc Yellow mongoose Cynictis penicillata South Africa South Africa TRUE 193 unknown TS.004 32.84 unknown -117.25 41010 TS.004 UCSD FALSE none 11166 TS.004 fecal gut metagenome unknown Cynictis penicillata 749906 Cynictis penicillata TS.004.mongoose gut sample FD.0013.addax AGGACGCCAGCA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 12/18/12 Montpellier Zoo Addax Addax nasomaculatus France Delsuc TRUE 193 mont.addax.1 mont.addax.1 unknown 32.84 adult -117.25 59515 FD.0013 UCSD FALSE none 11166 FD.0013 fecal gut metagenome unknown Addax nasomaculatus 749906 Addax nasomaculatus FD.0013.addax gut sample FD.0147.capuchin AGGGAGCTTCGG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 5/19/13 Sigean African Reserve Tufted capuchin Cebus apella France Delsuc TRUE 193 unknown sig.tuftedcapuchin.1 32.84 unknown -117.25 1093778 FD.0147 UCSD FALSE none 11166 FD.0147 fecal gut metagenome female Cebus apella 749906 Cebus apella FD.0147.capuchin gut sample FD.0305.guenon AGTAATAACAAG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 11446186 none captive 6/12/13 Montpellier Zoo Moustached guenon Cercopithecus cephus France Delsuc TRUE 193 unknown mont.11446186 32.84 unknown -117.25 9535 FD.0305 UCSD FALSE none 11166 FD.0305 fecal gut metagenome female Cercopithecus cephus 749906 Cercopithecus cephus FD.0305.guenon gut sample ZU.18240.elephant AGTCTTAAAGGA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Chandra 18240 captive 11/5/14 Zurich Zoo Asian elephant Elephas maximus Switzerland Zurich TRUE 193 healthy zurich.Chandra 32.84 adult -117.25 9783 ZU.18240 UCSD FALSE none 11166 ZU.18240 fecal gut metagenome female Elephas maximus 749906 Elephas maximus ZU.18240.elephant gut sample ZU.18248.hyrax AGTTATTCTAGT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Quarantine 18248 captive 10/22/14 Zurich Zoo rock hyrax Procavia capensis Switzerland Zurich TRUE 193 healthy zurich.rockhyrax.1 32.84 unknown -117.25 9813 ZU.18248 UCSD FALSE none 11166 ZU.18248 fecal gut metagenome unknown Procavia capensis 749906 Procavia capensis ZU.18248.hyrax gut sample FD.0259.monkey ATACTGAGTGAA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 7/24/13 Sigean African Reserve Blackcapped squirrel monkey Saimiri boliviensis France Delsuc TRUE 193 unknown sig.blackcappedsquirrelmonkey.2 32.84 unknown -117.25 27679 FD.0259 UCSD FALSE none 11166 FD.0259 fecal gut metagenome female Saimiri boliviensis 749906 Saimiri boliviensis FD.0259.monkey gut sample FD.0084.mousedeer ATAGACACTCCG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 5/23/13 Lille Zoo Java mousedeer Tragulus javanicus France Delsuc TRUE 193 lille.javamousedeer.2 lille.javamousedeer.2 unknown 32.84 unknown -117.25 9849 FD.0084 UCSD FALSE none 11166 FD.0084 fecal gut metagenome unknown Tragulus javanicus 749906 Tragulus javanicus FD.0084.mousedeer gut sample FD.0040.giraffe ATCGCCGCCTTG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Philippo none captive 3/29/13 Sigean African Reserve Reticulated giraffe Giraffa camelopardalis reticulata France Delsuc TRUE 193 healthy sig.Philippo 32.84 adult -117.25 409609 FD.0040 UCSD FALSE none 11166 FD.0040 fecal gut metagenome male Giraffa camelopardalis reticulata 749906 Giraffa camelopardalis FD.0040.giraffe gut sample FD.0125.wolf ATCGTTATATCA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 2/12/14 Toulon Zoo Wolf Canis lupus France Delsuc TRUE 193 toulon.wolf.2 toulon.wolf.2 diseased 32.84 adult -117.25 9612 FD.0125 UCSD FALSE none 11166 FD.0125 fecal gut metagenome male Canis lupus 749906 Canis lupus FD.0125.wolf gut sample TS.127.pangolin ATGGATAGCTAA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.127 none wild 7/29/14 Fred Delsuc Cape pangolin Manis temmincki South Africa South Africa TRUE 193 unknown TS.127 32.84 unknown -117.25 302418 TS.127 UCSD FALSE none 11166 TS.127 intestinal gut metagenome unknown Manis temmincki 749906 Manis temminckii TS.127.pangolin gut sample FD.0029.elephant ATTCGGTAGTGC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 check on tube none captive 3/29/13 Sigean African Reserve African elephant Loxodonta africana France Delsuc TRUE 193 healthy sig.africanelepant.3 32.84 adult -117.25 9785 FD.0029 UCSD FALSE none 11166 FD.0029 fecal gut metagenome male Loxodonta africana 749906 Loxodonta africana FD.0029.elephant gut sample ZU.18208.tapir ATTTGAAGAGGT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Amapa 18208 captive 11/11/14 Zurich Zoo South American tapir Tapirus terrestris Switzerland Zurich TRUE 193 healthy zurich.Amapa 32.84 adult -117.25 9801 ZU.18208 UCSD FALSE none 11166 ZU.18208 fecal gut metagenome female Tapirus terrestris 749906 Tapirus terrestris ZU.18208.tapir gut sample TS.015.flycatcher ATTTGCTTTGCC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.015 none wild 7/25/14 Fred Delsuc Chat flycatcher Melaenornis infuscatus South Africa South Africa TRUE 193 unknown TS.015 32.84 unknown -117.25 245055 TS.015 UCSD FALSE none 11166 TS.015 cloacal gut metagenome unknown Melaenornis infuscatus 749906 Bradornis infuscatus TS.015.flycatcher gut sample ZU.18245.elephant CAACTTAATGTT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Maxi 18245 captive 11/5/14 Zurich Zoo Asian elephant Elephas maximus Switzerland Zurich TRUE 193 healthy zurich.Maxi 32.84 adult -117.25 9783 ZU.18245 UCSD FALSE none 11166 ZU.18245 fecal gut metagenome male Elephas maximus 749906 Elephas maximus ZU.18245.elephant gut sample FD.0301.macaque CACTAGACCCAC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 4/5/13 Montpellier Zoo Barbary macaque Macaca sylvanus France Delsuc TRUE 193 mont.barbarymacaque.1 mont.barbarymacaque.1 unknown 32.84 unknown -117.25 9546 FD.0301 UCSD FALSE none 11166 FD.0301 fecal gut metagenome unknown Macaca sylvanus 749906 Macaca sylvanus FD.0301.macaque gut sample TS.170.impala CAGAAATGTGTC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.170 none wild 7/30/14 Fred Delsuc Impala Aepyceros melampus South Africa South Africa TRUE 193 unknown TS.170 32.84 unknown -117.25 9897 TS.170 UCSD FALSE none 11166 TS.170 fecal gut metagenome male Aepyceros melampus 749906 Aepyceros melampus TS.170.impala gut sample ZU.18249.zebra CAGACCGGACGA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Stripes 18249 captive 12/21/14 Zurich Zoo Chapman Zebra Equus burchelli chapmani Switzerland Zurich TRUE 193 healthy zurich.Stripes 32.84 adult -117.25 192603 ZU.18249 UCSD FALSE none 11166 ZU.18249 fecal gut metagenome male Equus burchelli chapmani 749906 Equus burchellii ZU.18249.zebra gut sample FD.0031.rhinoceros CAGCTGGTTCAA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Douala none captive 3/29/13 Sigean African Reserve White rhinoceros Ceratotherium simum France Delsuc TRUE 193 healthy sig.Douala 32.84 adult -117.25 9807 FD.0031 UCSD FALSE none 11166 FD.0031 fecal gut metagenome female Ceratotherium simum 749906 Ceratotherium simum FD.0031.rhinoceros gut sample TS.175.aardvark CAGGGTAGGGTA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.175 none wild 7/30/14 Fred Delsuc Aardvark Orycteropus afer South Africa South Africa TRUE 193 unknown TS.175 32.84 unknown -117.25 9818 TS.175 UCSD FALSE none 11166 TS.175 fecal gut metagenome unknown Orycteropus afer 749906 Orycteropus afer TS.175.aardvark gut sample FD.0139.loris CATAAATTCTTG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 3106 none captive 4/17/14 Lille Zoo Pygmy slow loris Nycticebus pygmaeus France Delsuc TRUE 193 healthy lille.3106 32.84 juvenile -117.25 101278 FD.0139 UCSD FALSE none 11166 FD.0139 fecal gut metagenome female Nycticebus pygmaeus 749906 Nycticebus pygmaeus FD.0139.loris gut sample FD.0186.marmoset CATGAACAGTGT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 4/9/13 Sigean African Reserve Whiteheaded marmoset Callithrix geoffroyi France Delsuc TRUE 193 unknown sig.whiteheadedmarmoset.1 32.84 unknown -117.25 52231 FD.0186 UCSD FALSE none 11166 FD.0186 fecal gut metagenome female Callithrix geoffroyi 749906 Callithrix geoffroyi FD.0186.marmoset gut sample FD.0066.deer CATGATTAAGAG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 1/3/13 Gramat Animal Park Sika deer Cervus nippon France Delsuc TRUE 193 gramat.sikadeer.2 gramat.sikadeer.2 unknown 32.84 adult -117.25 9863 FD.0066 UCSD FALSE none 11166 FD.0066 fecal gut metagenome unknown Cervus nippon 749906 Cervus nippon FD.0066.deer gut sample TS.121.pangolin CATTCAGTTATA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.121 none wild 7/29/14 Fred Delsuc Cape pangolin Manis temmincki South Africa South Africa TRUE 193 unknown TS.121 32.84 unknown -117.25 302418 TS.121 UCSD FALSE none 11166 TS.121 intestinal gut metagenome unknown Manis temmincki 749906 Manis temminckii TS.121.pangolin gut sample TS.122.pangolin CCAGATATAGCA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.122 none wild 7/29/14 Fred Delsuc Cape pangolin Manis temmincki South Africa South Africa TRUE 193 unknown TS.122 32.84 unknown -117.25 302418 TS.122 UCSD FALSE none 11166 TS.122 intestinal gut metagenome unknown Manis temmincki 749906 Manis temminckii TS.122.pangolin gut sample ZU.18239.elephant CCAGCGCTTCAC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Farha 18239 captive 11/5/14 Zurich Zoo Asian elephant Elephas maximus Switzerland Zurich TRUE 193 healthy zurich.Farha 32.84 adult -117.25 9783 ZU.18239 UCSD FALSE none 11166 ZU.18239 fecal gut metagenome female Elephas maximus 749906 Elephas maximus ZU.18239.elephant gut sample ZU.18251.zebra CCATAGGAGGCG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Kumani 18251 captive 12/21/14 Zurich Zoo Chapman Zebra Equus burchelli chapmani Switzerland Zurich TRUE 193 healthy zurich.Kumani 32.84 adult -117.25 192603 ZU.18251 UCSD FALSE none 11166 ZU.18251 fecal gut metagenome female Equus burchelli chapmani 749906 Equus burchellii ZU.18251.zebra gut sample ZU.18207.rhinoceros CCGAAACGGAGC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Jeremy 18207 captive 11/13/14 Zurich Zoo Eastern black rhinoceros Diceros bicornis michaeli Switzerland Zurich TRUE 193 healthy zurich.Jeremy 32.84 adult -117.25 310714 ZU.18207 UCSD FALSE none 11166 ZU.18207 fecal gut metagenome male Diceros bicornis michaeli 749906 Diceros bicornis ZU.18207.rhinoceros gut sample FD.0299.deer CCGCATGACCTA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 4/22/13 Montpellier Zoo Vietnamese sika deer Cervus nippon pseudaxis France Delsuc TRUE 193 mont.vietnamesesikadeer.1 mont.vietnamesesikadeer.1 unknown 32.84 unknown -117.25 92868 FD.0299 UCSD FALSE none 11166 FD.0299 fecal gut metagenome unknown Cervus nippon pseudaxis 749906 Cervus nippon FD.0299.deer gut sample ZU.18254.sloth CCTAAGAGCATC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 ZU.18254 18254 captive 10/28/14 Zurich Zoo Linnaeus twotoed sloth trocken Choloepus didactylus Switzerland Zurich TRUE 193 healthy zurich.ZU.18254 32.84 unknown -117.25 27675 ZU.18254 UCSD FALSE none 11166 ZU.18254 fecal gut metagenome unknown Choloepus didactylus 749906 Choloepus didactylus ZU.18254.sloth gut sample FD.0037.rhinoceros CGAGGGAAAGTC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Lima none captive 3/29/13 Sigean African Reserve White rhinoceros Ceratotherium simum France Delsuc TRUE 193 healthy sig.Lima 32.84 juvenile -117.25 9807 FD.0037 UCSD FALSE none 11166 FD.0037 fecal gut metagenome female Ceratotherium simum 749906 Ceratotherium simum FD.0037.rhinoceros gut sample FD.0277.monkey CGATATCAGTAG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 7/29/13 Sigean African Reserve Blackcapped squirrel monkey Saimiri boliviensis France Delsuc TRUE 193 unknown sig.blackcappedsquirrelmonkey.3 32.84 unknown -117.25 27679 FD.0277 UCSD FALSE none 11166 FD.0277 fecal gut metagenome male Saimiri boliviensis 749906 Saimiri boliviensis FD.0277.monkey gut sample TS.112.pangolin CGCAGATTAGTA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.112 none wild 7/29/14 Fred Delsuc Cape pangolin Manis temmincki South Africa South Africa TRUE 193 unknown TS.112 32.84 unknown -117.25 302418 TS.112 UCSD FALSE none 11166 TS.112 colon gut metagenome unknown Manis temmincki 749906 Manis temminckii TS.112.pangolin gut sample TS.126.pangolin CGCGGCGCAGCT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.126 none wild 7/29/14 Fred Delsuc Cape pangolin Manis temmincki South Africa South Africa TRUE 193 unknown TS.126 32.84 unknown -117.25 302418 TS.126 UCSD FALSE none 11166 TS.126 intestinal gut metagenome unknown Manis temmincki 749906 Manis temminckii TS.126.pangolin gut sample FD.0045.ass CGCTGGCTTTAG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Tobi none captive 3/29/13 Sigean African Reserve Somali wild ass Equus asinus somalicus France Delsuc TRUE 193 healthy sig.Tobi 32.84 adult -117.25 73336 FD.0045 UCSD FALSE none 11166 FD.0045 fecal gut metagenome male Equus asinus somalicus 749906 Equus asinus FD.0045.ass gut sample TS.150.zebra CGGCGATGAAAG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.150 none wild 7/30/14 Fred Delsuc Plain zebra Equus burchellii South Africa South Africa TRUE 193 unknown TS.150 32.84 unknown -117.25 9790 TS.150 UCSD FALSE none 11166 TS.150 fecal gut metagenome unknown Equus burchellii 749906 Equus burchellii TS.150.zebra gut sample FD.0282.otter CGGGTCCTCTTG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 3/3/13 Montpellier Zoo European otter Lutra lutra France Delsuc TRUE 193 mont.europeanotter.1 mont.europeanotter.1 unknown 32.84 unknown -117.25 9657 FD.0282 UCSD FALSE none 11166 FD.0282 fecal gut metagenome unknown Lutra lutra 749906 Lutra lutra FD.0282.otter gut sample ZU.18202.orangutan CGGTAGTTGATC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 enclosure 1 18202 captive 10/28/14 Zurich Zoo Sumatran orangutan Pongo abelii Switzerland Zurich TRUE 193 healthy zurich.sumatranorangutan.exh1 32.84 unknown -117.25 9601 ZU.18202 UCSD FALSE none 11166 ZU.18202 fecal gut metagenome unknown Pongo abelii 749906 Pongo abelii ZU.18202.orangutan gut sample TS.080.mongoose CGTGGTGGGAAC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.080 none wild 7/28/14 Fred Delsuc Yellow mongoose Cynictis penicillata South Africa South Africa TRUE 193 unknown TS.080 32.84 unknown -117.25 41010 TS.080 UCSD FALSE none 11166 TS.080 fecal gut metagenome unknown Cynictis penicillata 749906 Cynictis penicillata TS.080.mongoose gut sample TS.210.wilddog CGTGTTATGTGG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.210 none wild 8/1/14 Fred Delsuc African wild dog Lycaon pictus South Africa South Africa TRUE 193 unknown TS.210 32.84 unknown -117.25 9622 TS.210 UCSD FALSE none 11166 TS.210 fecal gut metagenome unknown Lycaon pictus 749906 Lycaon pictus TS.210.wilddog gut sample ZU.18191.rhinoceros CGTTTATCCGTT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Samira 18191 captive 11/13/14 Zurich Zoo Eastern black rhinoceros Diceros bicornis michaeli Switzerland Zurich TRUE 193 healthy zurich.Samira 32.84 adult -117.25 310714 ZU.18191 UCSD FALSE none 11166 ZU.18191 fecal gut metagenome female Diceros bicornis michaeli 749906 Diceros bicornis ZU.18191.rhinoceros gut sample FD.0088.aardvark CTAACCTCATAT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none wild 11/23/13 TdR Nature Reserve Aardvark Orycteropus afer South Africa Delsuc TRUE 193 tdr.aardvark.2 tdr.aardvark.2 unknown 32.84 unknown -117.25 9818 FD.0088 UCSD FALSE none 11166 FD.0088 fecal gut metagenome unknown Orycteropus afer 749906 Orycteropus afer FD.0088.aardvark gut sample FD.0198.meerkat CTACCGATTGCG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 5/20/13 Sigean African Reserve Meerkat Suricata suricatta France Delsuc TRUE 193 unknown sig.meerkat.1 32.84 unknown -117.25 37032 FD.0198 UCSD FALSE none 11166 FD.0198 fecal gut metagenome male Suricata suricatta 749906 Suricata suricatta FD.0198.meerkat gut sample TS.116.pangolin CTAGTCGCTGGT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.116 none wild 7/29/14 Fred Delsuc Cape pangolin Manis temmincki South Africa South Africa TRUE 193 unknown TS.116 32.84 unknown -117.25 302418 TS.116 UCSD FALSE none 11166 TS.116 intestinal gut metagenome unknown Manis temmincki 749906 Manis temminckii TS.116.pangolin gut sample FD.0115.serval CTCACGCAATGC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Soleil none captive 5/8/13 Toulon Zoo Serval Leptailurus serval France Delsuc TRUE 193 diseased toulon.Soleil 32.84 adult -117.25 61405 FD.0115 UCSD FALSE none 11166 FD.0115 fecal gut metagenome male Leptailurus serval 749906 Leptailurus serval FD.0115.serval gut sample TS.124.pangolin CTCATATGCTAT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.124 none wild 7/29/14 Fred Delsuc Cape pangolin Manis temmincki South Africa South Africa TRUE 193 unknown TS.124 32.84 unknown -117.25 302418 TS.124 UCSD FALSE none 11166 TS.124 intestinal gut metagenome unknown Manis temmincki 749906 Manis temminckii TS.124.pangolin gut sample TS.115.pangolin CTCTATTCCACC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.115 none wild 7/29/14 Fred Delsuc Cape pangolin Manis temmincki South Africa South Africa TRUE 193 unknown TS.115 32.84 unknown -117.25 302418 TS.115 UCSD FALSE none 11166 TS.115 intestinal gut metagenome unknown Manis temmincki 749906 Manis temminckii TS.115.pangolin gut sample TS.125.pangolin CTCTTCTGATCA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.125 none wild 7/29/14 Fred Delsuc Cape pangolin Manis temmincki South Africa South Africa TRUE 193 unknown TS.125 32.84 unknown -117.25 302418 TS.125 UCSD FALSE none 11166 TS.125 intestinal gut metagenome unknown Manis temmincki 749906 Manis temminckii TS.125.pangolin gut sample FD.0171.antelope CTGGTAAGTCCA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 4/28/13 Sigean African Reserve Sable antelope Hippotragus niger France Delsuc TRUE 193 unknown sig.sableantelope.1 32.84 unknown -117.25 37189 FD.0171 UCSD FALSE none 11166 FD.0171 fecal gut metagenome male Hippotragus niger 749906 Hippotragus niger FD.0171.antelope gut sample TS.143.kudu CTGTACTTCTAA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.143 none wild 7/30/14 Fred Delsuc Kudu Tragelaphus strepsiceros South Africa South Africa TRUE 193 unknown TS.143 32.84 unknown -117.25 9946 TS.143 UCSD FALSE none 11166 TS.143 fecal gut metagenome unknown Tragelaphus strepsiceros 749906 Tragelaphus strepsiceros TS.143.kudu gut sample TS.180.waterbuck CTTATAGAGAAG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.180 none wild 7/31/14 Fred Delsuc Waterbuck Kobus ellipsiprymnus South Africa South Africa TRUE 193 unknown TS.180 32.84 unknown -117.25 9962 TS.180 UCSD FALSE none 11166 TS.180 fecal gut metagenome unknown Kobus ellipsiprymnus 749906 Kobus ellipsiprymnus TS.180.waterbuck gut sample TS.043.chat CTTCGGAGGGAG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.043 none wild 7/26/14 Fred Delsuc Southern anteating chat Myrmecocichla formicivora South Africa South Africa TRUE 193 unknown TS.043 32.84 unknown -117.25 889805 TS.043 UCSD FALSE none 11166 TS.043 cloacal gut metagenome unknown Myrmecocichla formicivora 749906 Myrmecocichla formicivora TS.043.chat gut sample FD.0308.guenon CTTCTTCGCCCT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 M10109 none captive 6/6/13 Montpellier Zoo Moustached guenon Cercopithecus cephus France Delsuc TRUE 193 unknown mont.M10109 32.84 unknown -117.25 9535 FD.0308 UCSD FALSE none 11166 FD.0308 fecal gut metagenome male Cercopithecus cephus 749906 Cercopithecus cephus FD.0308.guenon gut sample FD.0034.rhinoceros CTTGAGAAATCG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Edgard none captive 3/29/13 Sigean African Reserve White rhinoceros Ceratotherium simum France Delsuc TRUE 193 healthy sig.Edgard 32.84 adult -117.25 9807 FD.0034 UCSD FALSE none 11166 FD.0034 fecal gut metagenome male Ceratotherium simum 749906 Ceratotherium simum FD.0034.rhinoceros gut sample FD.0136.tamarin CTTTGATAATAA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 2944 none captive 4/15/14 Lille Zoo Whitelipped tamarin Saguinus labiatus France Delsuc TRUE 193 healthy lille.2944 32.84 adult -117.25 78454 FD.0136 UCSD FALSE none 11166 FD.0136 fecal gut metagenome male Saguinus labiatus 749906 Saguinus labiatus FD.0136.tamarin gut sample FD.0027.elephant GAACAAAGAGCG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 check on tube none captive 3/29/13 Sigean African Reserve African elephant Loxodonta africana France Delsuc TRUE 193 healthy sig.africanelepant.2 32.84 adult -117.25 9785 FD.0027 UCSD FALSE none 11166 FD.0027 fecal gut metagenome female Loxodonta africana 749906 Loxodonta africana FD.0027.elephant gut sample FD.0271.lion GAACTCGCTATG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 6/14/13 Sigean African Reserve African lion Panthera leo France Delsuc TRUE 193 unknown sig.africanlion.1 32.84 unknown -117.25 9689 FD.0271 UCSD FALSE none 11166 FD.0271 fecal gut metagenome female Panthera leo 749906 Panthera leo FD.0271.lion gut sample FD.0143.loris GAAGATCTATCG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 2953 none captive 4/17/14 Lille Zoo Pygmy slow loris Nycticebus pygmaeus France Delsuc TRUE 193 healthy lille.2953 32.84 adult -117.25 101278 FD.0143 UCSD FALSE none 11166 FD.0143 fecal gut metagenome female Nycticebus pygmaeus 749906 Nycticebus pygmaeus FD.0143.loris gut sample FD.0048.dromedary GAATGCGTATAA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Gertrude none captive 3/29/13 Sigean African Reserve Dromedary Camelus dromedarius France Delsuc TRUE 193 healthy sig.Gertrude 32.84 adult -117.25 9838 FD.0048 UCSD FALSE none 11166 FD.0048 fecal gut metagenome female Camelus dromedarius 749906 Camelus dromedarius FD.0048.dromedary gut sample TS.133.duiker GACCACTGCTGT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.133 none wild 7/30/14 Fred Delsuc Common duiker Sylvicapra grimmia South Africa South Africa TRUE 193 unknown TS.133 32.84 unknown -117.25 119562 TS.133 UCSD FALSE none 11166 TS.133 fecal gut metagenome unknown Sylvicapra grimmia 749906 Sylvicapra grimmia TS.133.duiker gut sample FD.0316.mangabey GACGTCCCTCCA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 M10009 none captive 6/6/13 Montpellier Zoo Goldenbellied mangabey Cercocebus chrysogaster France Delsuc TRUE 193 unknown mont.M10009 32.84 unknown -117.25 75569 FD.0316 UCSD FALSE none 11166 FD.0316 fecal gut metagenome male Cercocebus chrysogaster 749906 Cercocebus chrysogaster FD.0316.mangabey gut sample TS.119.pangolin GAGAATGGAAAG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.119 none wild 7/29/14 Fred Delsuc Cape pangolin Manis temmincki South Africa South Africa TRUE 193 unknown TS.119 32.84 unknown -117.25 302418 TS.119 UCSD FALSE none 11166 TS.119 intestinal gut metagenome unknown Manis temmincki 749906 Manis temminckii TS.119.pangolin gut sample FD.0087.aardvark GAGAGGGATCAC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none wild 11/23/13 TdR Nature Reserve Aardvark Orycteropus afer South Africa Delsuc TRUE 193 tdr.aardvark.1 tdr.aardvark.1 unknown 32.84 unknown -117.25 9818 FD.0087 UCSD FALSE none 11166 FD.0087 fecal gut metagenome unknown Orycteropus afer 749906 Orycteropus afer FD.0087.aardvark gut sample FD.0126.hyena GAGAGTCCACTT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 00-05FD-B5-A1 none captive 2/10/14 Toulon Zoo Brown hyena Parahyaena brunnea France Delsuc TRUE 193 healthy toulon.00.05FD.B5.A1 32.84 adult -117.25 172271 FD.0126 UCSD FALSE none 11166 FD.0126 fecal gut metagenome male Hyaena brunnea 749906 Parahyaena brunnea FD.0126.hyena gut sample TS.137.aardvark GAGCGCCGAACA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.137 none wild 7/30/14 Fred Delsuc Aardvark Orycteropus afer South Africa South Africa TRUE 193 unknown TS.137 32.84 unknown -117.25 9818 TS.137 UCSD FALSE etoh 11166 TS.137 fecal gut metagenome unknown Orycteropus afer 749906 Orycteropus afer TS.137.aardvark gut sample FD.hippo.antelope GAGGCGCCATAG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 4/21/13 Sigean African Reserve Roan antelope Hippotragus equinus France Delsuc TRUE 193 unknown sig.roanantelope.1 32.84 unknown -117.25 37186 FD.hippo UCSD FALSE none 11166 FD.hippo fecal gut metagenome female Hippotragus equinus 749906 Hippotragus equinus FD.hippo.antelope gut sample ZU.18210.bear GAGTCCGTTGCT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Apu 18210 captive 1/21/15 Zurich Zoo Spectacled bear Tremarctos ornatus Switzerland Zurich TRUE 193 healthy zurich.Apu 32.84 adult -117.25 9638 ZU.18210 UCSD FALSE none 11166 ZU.18210 fecal gut metagenome male Tremarctos ornatus 749906 Tremarctos ornatus ZU.18210.bear gut sample FD.0105.jaguar GATGCGCAGGAC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 250000000000000 none captive 4/8/13 Toulon Zoo Jaguar Panthera onca France Delsuc TRUE 193 diseased toulon.250229600059990 32.84 adult -117.25 9690 FD.0105 UCSD FALSE none 11166 FD.0105 fecal gut metagenome female Panthera onca 749906 Panthera onca FD.0105.jaguar gut sample ZU.18257.anteater GCAAGAATACAT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 females 18257 captive 11/5/14 Zurich Zoo Giant anteater Myrmecophaga tridactyla Switzerland Zurich TRUE 193 healthy zurich.anteater.1 32.84 adult -117.25 71006 ZU.18257 UCSD FALSE none 11166 ZU.18257 fecal gut metagenome female Myrmecophaga tridactyla 749906 Myrmecophaga tridactyla ZU.18257.anteater gut sample ZU.18253.lemur GCAGAGAGGCTA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Tantely 18253 captive 10/31/14 Zurich Zoo Red ruffed lemur Varecia rubra Switzerland Zurich TRUE 193 healthy zurich.Tantely 32.84 adult -117.25 554167 ZU.18253 UCSD FALSE none 11166 ZU.18253 fecal gut metagenome male Varecia rubra 749906 Varecia rubra ZU.18253.lemur gut sample TS.208.wilddog GCATGTCGAAAT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.208 none wild 8/1/14 Fred Delsuc African wild dog Lycaon pictus South Africa South Africa TRUE 193 unknown TS.208 32.84 unknown -117.25 9622 TS.208 UCSD FALSE none 11166 TS.208 fecal gut metagenome unknown Lycaon pictus 749906 Lycaon pictus TS.208.wilddog gut sample FD.0024.elephant GCCAAGGATAGG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 check on tube none captive 3/29/13 Sigean African Reserve African elephant Loxodonta africana France Delsuc TRUE 193 healthy sig.africanelepant.1 32.84 adult -117.25 9785 FD.0024 UCSD FALSE none 11166 FD.0024 fecal gut metagenome female Loxodonta africana 749906 Loxodonta africana FD.0024.elephant gut sample TS.099.zebra GCCGCGGGATCA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.099 none wild 7/29/14 Fred Delsuc Mountain zebra Equus zebra hartmannae South Africa South Africa TRUE 193 unknown TS.099 32.84 unknown -117.25 73335 TS.099 UCSD FALSE none 11166 TS.099 fecal gut metagenome unknown Equus zebra hartmannae 749906 Equus zebra TS.099.zebra gut sample TS.096.rockrabbit GCGTTAACCCAA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.096 none wild 7/29/14 Fred Delsuc Red rockrabbit Pronolagus rupestris South Africa South Africa TRUE 193 unknown TS.096 32.84 unknown -117.25 42061 TS.096 UCSD FALSE none 11166 TS.096 fecal gut metagenome unknown Pronolagus rupestris 749906 Pronolagus rupestris TS.096.rockrabbit gut sample ZU.18237.lemur GCTAGACACTAC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Tsoka 18237 captive 10/31/14 Zurich Zoo Red ruffed lemur Varecia rubra Switzerland Zurich TRUE 193 healthy zurich.Tsoka 32.84 adult -117.25 554167 ZU.18237 UCSD FALSE none 11166 ZU.18237 fecal gut metagenome male Varecia rubra 749906 Varecia rubra ZU.18237.lemur gut sample FD.0065.deer GCTATATCCAGG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 1/3/13 Gramat Animal Park Sika deer Cervus nippon France Delsuc TRUE 193 gramat.sikadeer.1 gramat.sikadeer.1 unknown 32.84 adult -117.25 9863 FD.0065 UCSD FALSE none 11166 FD.0065 fecal gut metagenome unknown Cervus nippon 749906 Cervus nippon FD.0065.deer gut sample TS.120.pangolin GCTTCATTTCTG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.120 none wild 7/29/14 Fred Delsuc Cape pangolin Manis temmincki South Africa South Africa TRUE 193 unknown TS.120 32.84 unknown -117.25 302418 TS.120 UCSD FALSE none 11166 TS.120 intestinal gut metagenome unknown Manis temmincki 749906 Manis temminckii TS.120.pangolin gut sample FD.0192.monkey GGAATCCGATTA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Leko none captive 3/9/13 Sigean African Reserve Blackcapped squirrel monkey Saimiri boliviensis France Delsuc TRUE 193 unknown sig.Leko 32.84 unknown -117.25 27679 FD.0192 UCSD FALSE none 11166 FD.0192 fecal gut metagenome male Saimiri boliviensis 749906 Saimiri boliviensis FD.0192.monkey gut sample FD.0174.antelope GGACTTCCAGCT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 5/25/13 Sigean African Reserve Sable antelope Hippotragus niger France Delsuc TRUE 193 unknown sig.sableantelope.2 32.84 unknown -117.25 37189 FD.0174 UCSD FALSE none 11166 FD.0174 fecal gut metagenome male Hippotragus niger 749906 Hippotragus niger FD.0174.antelope gut sample FD.0183.lemur GGAGGAGCAATA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 4/10/13 Sigean African Reserve Gray mouse lemur Microcebus murinus France Delsuc TRUE 193 unknown sig.graymouselemur.1 32.84 unknown -117.25 30608 FD.0183 UCSD FALSE none 11166 FD.0183 fecal gut metagenome unknown Microcebus murinus 749906 Microcebus murinus FD.0183.lemur gut sample TS.153.eland GGCCCTGTGGGC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.153 none wild 7/30/14 Fred Delsuc Eland Tragelaphus oryx South Africa South Africa TRUE 193 unknown TS.153 32.84 unknown -117.25 9945 TS.153 UCSD FALSE none 11166 TS.153 fecal gut metagenome unknown Tragelaphus oryx 749906 Taurotragus oryx TS.153.eland gut sample TS.114.pangolin GGCCTATAAGTC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.114 none wild 7/29/14 Fred Delsuc Cape pangolin Manis temmincki South Africa South Africa TRUE 193 unknown TS.114 32.84 unknown -117.25 302418 TS.114 UCSD FALSE none 11166 TS.114 intestinal gut metagenome unknown Manis temmincki 749906 Manis temminckii TS.114.pangolin gut sample ZU.18269.anteater GGTAATAGAGTT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Inca 18269 captive 10/30/14 Zurich Zoo Giant anteater Myrmecophaga tridactyla Switzerland Zurich TRUE 193 healthy zurich.Inca 32.84 adult -117.25 71006 ZU.18269 UCSD FALSE none 11166 ZU.18269 fecal gut metagenome male Myrmecophaga tridactyla 749906 Myrmecophaga tridactyla ZU.18269.anteater gut sample ZU.18268.orangutan GGTCCTTCCCGA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 enclosure 2 18268 captive 11/10/14 Zurich Zoo Sumatran orangutan Pongo abelii Switzerland Zurich TRUE 193 healthy zurich.sumatranorangutan.exh2 32.84 unknown -117.25 9601 ZU.18268 UCSD FALSE none 11166 ZU.18268 fecal gut metagenome unknown Pongo abelii 749906 Pongo abelii ZU.18268.orangutan gut sample FD.0020.antelope GGTGTGAGAAAG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 2/6/13 Montpellier Zoo Sable antelope Hippotragus niger France Delsuc TRUE 193 mont.sableantelope.2 mont.sableantelope.2 unknown 32.84 adult -117.25 37189 FD.0020 UCSD FALSE none 11166 FD.0020 fecal gut metagenome unknown Hippotragus niger 749906 Hippotragus niger FD.0020.antelope gut sample TS.177.hyena GTAAATTCAGGC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.177 none wild 7/31/14 Fred Delsuc Brown hyaena Parahyaena brunnea South Africa South Africa TRUE 193 unknown TS.177 32.84 unknown -117.25 172271 TS.177 UCSD FALSE etoh 11166 TS.177 fecal gut metagenome unknown Parahyaena brunnea 749906 Parahyaena brunnea TS.177.hyena gut sample ZU.18243.elephant GTAGGTGCTTAC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Thai 18243 captive 11/5/14 Zurich Zoo Asian elephant Elephas maximus Switzerland Zurich TRUE 193 healthy zurich.Thai 32.84 adult -117.25 9783 ZU.18243 UCSD FALSE none 11166 ZU.18243 fecal gut metagenome male Elephas maximus 749906 Elephas maximus ZU.18243.elephant gut sample ZU.18242.sloth GTCAATTAGTGG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 ZU.18242 18242 captive 10/28/14 Zurich Zoo Linnaeus twotoed sloth Choloepus didactylus Switzerland Zurich TRUE 193 healthy zurich.ZU.18242 32.84 unknown -117.25 27675 ZU.18242 UCSD FALSE none 11166 ZU.18242 fecal gut metagenome unknown Choloepus didactylus 749906 Choloepus didactylus ZU.18242.sloth gut sample TS.082.pangolin GTCATTGGGCTA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.082 none wild 7/28/14 Fred Delsuc Cape pangolin Manis temmincki South Africa South Africa TRUE 193 unknown TS.082 32.84 unknown -117.25 302418 TS.082 UCSD FALSE none 11166 TS.082 fecal gut metagenome unknown Manis temmincki 749906 Manis temminckii TS.082.pangolin gut sample FD.0241.wallaby GTCCCAGTCCCA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 5/29/13 Sigean African Reserve Rednecked wallaby Notamacropus rufogriseus France Delsuc TRUE 193 unknown sig.redneckedwallaby.1 32.84 unknown -117.25 1960652 FD.0241 UCSD FALSE none 11166 FD.0241 fecal gut metagenome male Macropus rufogriseus 749906 Notamacropus rufogriseus FD.0241.wallaby gut sample FD.0295.wolf GTCGGGCCGGTA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 4/11/13 Montpellier Zoo Iberian wolf Canis lupus signatus France Delsuc TRUE 193 mont.iberianwolf.1 mont.iberianwolf.1 unknown 32.84 unknown -117.25 425934 FD.0295 UCSD FALSE none 11166 FD.0295 fecal gut metagenome unknown Canis lupus signatus 749906 Canis lupus FD.0295.wolf gut sample ZU.18234.redpanda GTCTGACGGTCT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Liang 18234 captive 11/18/14 Zurich Zoo Red panda Ailurus fulgens Switzerland Zurich TRUE 193 healthy zurich.Liang 32.84 adult -117.25 9649 ZU.18234 UCSD FALSE none 11166 ZU.18234 fecal gut metagenome male Ailurus fulgens 749906 Ailurus fulgens ZU.18234.redpanda gut sample TS.174.aardvark GTGACCCTGTCA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.174 none wild 7/30/14 Fred Delsuc Aardvark Orycteropus afer South Africa South Africa TRUE 193 unknown TS.174 32.84 unknown -117.25 9818 TS.174 UCSD FALSE none 11166 TS.174 fecal gut metagenome unknown Orycteropus afer 749906 Orycteropus afer TS.174.aardvark gut sample FD.0130.tamarin GTGCGAGGACAA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 2943 none captive 4/15/14 Lille Zoo Whitelipped tamarin Saguinus labiatus France Delsuc TRUE 193 healthy lille.2943 32.84 adult -117.25 78454 FD.0130 UCSD FALSE none 11166 FD.0130 fecal gut metagenome male Saguinus labiatus 749906 Saguinus labiatus FD.0130.tamarin gut sample ZU.18199.gorilla GTGGCGCATGGA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 NYokumi 18199 captive 11/5/14 Zurich Zoo Western gorilla Gorilla gorilla gorilla Switzerland Zurich TRUE 193 healthy zurich.NYokumi 32.84 adult -117.25 9595 ZU.18199 UCSD FALSE none 11166 ZU.18199 fecal gut metagenome female Gorilla gorilla gorilla 749906 Gorilla gorilla ZU.18199.gorilla gut sample ZU.18228.gorilla GTGGGCGGCCCT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Haiba 18228 captive 11/5/14 Zurich Zoo Western gorilla Gorilla gorilla gorilla Switzerland Zurich TRUE 193 healthy zurich.Haiba 32.84 subadult -117.25 9595 ZU.18228 UCSD FALSE none 11166 ZU.18228 fecal gut metagenome female Gorilla gorilla gorilla 749906 Gorilla gorilla ZU.18228.gorilla gut sample FD.0250.monkey GTGTAATGTAGA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 6/16/13 Sigean African Reserve Blackcapped squirrel monkey Saimiri boliviensis France Delsuc TRUE 193 unknown sig.blackcappedsquirrelmonkey.1 32.84 juvenile -117.25 27679 FD.0250 UCSD FALSE none 11166 FD.0250 fecal gut metagenome female Saimiri boliviensis 749906 Saimiri boliviensis FD.0250.monkey gut sample FD.0072.guanaco GTTCCATCGGCC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 1/3/13 Gramat Animal Park Guanaco Lama guanicoe France Delsuc TRUE 193 gramat.guanaco.2 gramat.guanaco.2 unknown 32.84 adult -117.25 9840 FD.0072 UCSD FALSE none 11166 FD.0072 fecal gut metagenome unknown Lama guanicoe 749906 Lama guanicoe FD.0072.guanaco gut sample FD.0122.hyena GTTCGGTGTCCA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 250000000000000 none captive 2/7/14 Toulon Zoo Striped hyena Hyaena hyaena France Delsuc TRUE 193 diseased toulon.250228500018114 32.84 subadult -117.25 95912 FD.0122 UCSD FALSE none 11166 FD.0122 fecal gut metagenome female Hyaena hyaena 749906 Hyaena hyaena FD.0122.hyena gut sample ZU.18230.mousedeer GTTTGCTCGAGA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 female 18230 captive 11/5/14 Zurich Zoo Java mousedeer Tragulus javanicus Switzerland Zurich TRUE 193 healthy zurich.mousedeer.1 32.84 adult -117.25 9849 ZU.18230 UCSD FALSE none 11166 ZU.18230 fecal gut metagenome female Tragulus javanicus 749906 Tragulus javanicus ZU.18230.mousedeer gut sample ZU.18265.horse TAACCACCAACG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Shetland Pony 18265 captive 10/22/14 Zurich Zoo horse Equus caballus Switzerland Zurich TRUE 193 healthy zurich.Shetlandpony 32.84 unknown -117.25 9796 ZU.18265 UCSD FALSE none 11166 ZU.18265 fecal gut metagenome unknown Equus caballus 749906 Equus caballus ZU.18265.horse gut sample TS.056.chat TAAGAAACGTCA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.056 none wild 7/27/14 Fred Delsuc Southern anteating chat Myrmecocichla formicivora South Africa South Africa TRUE 193 unknown TS.056 32.84 unknown -117.25 889805 TS.056 UCSD FALSE none 11166 TS.056 cloacal gut metagenome unknown Myrmecocichla formicivora 749906 Myrmecocichla formicivora TS.056.chat gut sample TS.145.kudu TAATCATGTAAT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.145 none wild 7/30/14 Fred Delsuc Kudu Tragelaphus strepsiceros South Africa South Africa TRUE 193 unknown TS.145 32.84 unknown -117.25 9946 TS.145 UCSD FALSE none 11166 TS.145 fecal gut metagenome unknown Tragelaphus strepsiceros 749906 Tragelaphus strepsiceros TS.145.kudu gut sample FD.0313.mangabey TACACGCTGATG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 M10010 none captive 6/6/13 Montpellier Zoo Goldenbellied mangabey Cercocebus chrysogaster France Delsuc TRUE 193 unknown mont.M10010 32.84 unknown -117.25 75569 FD.0313 UCSD FALSE none 11166 FD.0313 fecal gut metagenome female Cercocebus chrysogaster 749906 Cercocebus chrysogaster FD.0313.mangabey gut sample FD.0051.watusi TACCTGTGTCTT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 3/29/13 Sigean African Reserve Watusi Bos taurus watusi France Delsuc TRUE 193 healthy sig.watusi.1 32.84 juvenile -117.25 9913 FD.0051 UCSD FALSE none 11166 FD.0051 fecal gut metagenome female Bos taurus watusi 749906 Bos taurus FD.0051.watusi gut sample FD.0127.tamarin TACTTAAACATC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 3008 none captive 4/15/14 Lille Zoo Whitelipped tamarin Saguinus labiatus France Delsuc TRUE 193 healthy lille.3008 32.84 adult -117.25 78454 FD.0127 UCSD FALSE none 11166 FD.0127 fecal gut metagenome male Saguinus labiatus 749906 Saguinus labiatus FD.0127.tamarin gut sample FD.0133.tamarin TAGACCGACTCC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 2832 none captive 4/15/14 Lille Zoo Whitelipped tamarin Saguinus labiatus France Delsuc TRUE 193 healthy lille.2832 32.84 adult -117.25 78454 FD.0133 UCSD FALSE none 11166 FD.0133 fecal gut metagenome male Saguinus labiatus 749906 Saguinus labiatus FD.0133.tamarin gut sample ZU.18190.lion TAGCGACCTCAC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 18190 captive 11/18/14 Zurich Zoo Indian lion Panthera leo Switzerland Zurich TRUE 193 healthy zurich.Indianlion.1 32.84 unknown -117.25 9689 ZU.18190 UCSD FALSE none 11166 ZU.18190 fecal gut metagenome unknown Panthera leo 749906 Panthera leo ZU.18190.lion gut sample TS.056b.chat TAGGAGAGACAG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.056 none wild 7/27/14 Fred Delsuc Southern anteating chat Myrmecocichla formicivora South Africa South Africa TRUE 193 unknown TS.056 32.84 unknown -117.25 889805 TS.056b UCSD FALSE none 11166 TS.056 cloacal gut metagenome unknown Myrmecocichla formicivora 749906 Myrmecocichla formicivora TS.056b.chat gut sample TS.182.giraffe TAGGCATGCTTG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.182 none wild 7/31/14 Fred Delsuc Giraffe Giraffa camelopardalis South Africa South Africa TRUE 193 unknown TS.182 32.84 unknown -117.25 9894 TS.182 UCSD FALSE none 11166 TS.182 fecal gut metagenome unknown Giraffa camelopardalis 749906 Giraffa camelopardalis TS.182.giraffe gut sample TS.042.warthog TAGGCGGTAGGC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.042 none wild 7/26/14 Fred Delsuc Warthog Phacochoerus africanus South Africa South Africa TRUE 193 unknown TS.042 32.84 unknown -117.25 41426 TS.042 UCSD FALSE none 11166 TS.042 fecal gut metagenome unknown Phacochoerus africanus 749906 Phacochoerus africanus TS.042.warthog gut sample FD.0189.monkey TAGGTAACCGAT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Kile none captive 4/3/13 Sigean African Reserve Blackcapped squirrel monkey Saimiri boliviensis France Delsuc TRUE 193 unknown sig.Kile 32.84 unknown -117.25 27679 FD.0189 UCSD FALSE none 11166 FD.0189 fecal gut metagenome male Saimiri boliviensis 749906 Saimiri boliviensis FD.0189.monkey gut sample FD.0093.caracal TAGTGTCGGATC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 956000000000000 none captive 6/18/13 Toulon Zoo Caracal Caracal caracal France Delsuc TRUE 193 healthy toulon.956000000952574 32.84 adult -117.25 61394 FD.0093 UCSD FALSE none 11166 FD.0093 fecal gut metagenome male Caracal caracal 749906 Caracal caracal FD.0093.caracal gut sample TS.006.rhino TATGCTCTCTCA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.006 none wild 7/25/14 Fred Delsuc Black rhino Diceros bicornis South Africa South Africa TRUE 193 unknown TS.006 32.84 unknown -117.25 9805 TS.006 UCSD FALSE none 11166 TS.006 fecal gut metagenome unknown Diceros bicornis 749906 Diceros bicornis TS.006.rhino gut sample FD.0325.wallaby TATTCTACATGA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 4/22/13 Montpellier Zoo Rednecked wallaby Notamacropus rufogriseus France Delsuc TRUE 193 mont.redneckedwallaby.1 mont.redneckedwallaby.1 unknown 32.84 unknown -117.25 1960652 FD.0325 UCSD FALSE none 11166 FD.0325 fecal gut metagenome unknown Macropus rufogriseus 749906 Notamacropus rufogriseus FD.0325.wallaby gut sample FD.0168.cheetah TCAAGCAATACG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 4/26/13 Sigean African Reserve Cheetah Acinonyx jubatus France Delsuc TRUE 193 unknown sig.cheetah.1 32.84 unknown -117.25 32536 FD.0168 UCSD FALSE none 11166 FD.0168 fecal gut metagenome female Acinonyx jubatus 749906 Acinonyx jubatus FD.0168.cheetah gut sample ZU.18200.redpanda TCACTGCTAGGA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Shang 18200 captive 11/18/14 Zurich Zoo Red panda Ailurus fulgens Switzerland Zurich TRUE 193 healthy zurich.Shang 32.84 adult -117.25 9649 ZU.18200 UCSD FALSE none 11166 ZU.18200 fecal gut metagenome female Ailurus fulgens 749906 Ailurus fulgens ZU.18200.redpanda gut sample TS.123.pangolin TCATACAGCCAG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.123 none wild 7/29/14 Fred Delsuc Cape pangolin Manis temmincki South Africa South Africa TRUE 193 unknown TS.123 32.84 unknown -117.25 302418 TS.123 UCSD FALSE none 11166 TS.123 intestinal gut metagenome unknown Manis temmincki 749906 Manis temminckii TS.123.pangolin gut sample TS.100.eland TCATTCCACTCA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.100 none wild 7/29/14 Fred Delsuc Eland Tragelaphus oryx South Africa South Africa TRUE 193 unknown TS.100 32.84 unknown -117.25 9945 TS.100 UCSD FALSE none 11166 TS.100 fecal gut metagenome unknown Tragelaphus oryx 749906 Taurotragus oryx TS.100.eland gut sample FD.0298.bear TCCGACCCGATC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 4/3/13 Montpellier Zoo Syrian brown bear Ursus arctos syriacus France Delsuc TRUE 193 mont.syrianbrownbear.1 mont.syrianbrownbear.1 unknown 32.84 unknown -117.25 627478 FD.0298 UCSD FALSE none 11166 FD.0298 fecal gut metagenome unknown Ursus arctos syriacus 749906 Ursus arctos FD.0298.bear gut sample TS.113.pangolin TCCTAGGTCCGA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.113 none wild 7/29/14 Fred Delsuc Cape pangolin Manis temmincki South Africa South Africa TRUE 193 unknown TS.113 32.84 unknown -117.25 302418 TS.113 UCSD FALSE none 11166 TS.113 intestinal gut metagenome unknown Manis temmincki 749906 Manis temminckii TS.113.pangolin gut sample ZU.18217.lemur TCGATAAGTAAG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Rupert 18217 captive 11/11/14 Zurich Zoo Redfronted brown lemur Eulemur rufus Switzerland Zurich TRUE 193 healthy zurich.Rupert 32.84 adult -117.25 859983 ZU.18217 UCSD FALSE none 11166 ZU.18217 fecal gut metagenome male Eulemur rufus 749906 Eulemur rufus ZU.18217.lemur gut sample FD.0280.lion TCGTAGTAATGG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 3/19/13 Montpellier Zoo African lion Panthera leo France Delsuc TRUE 193 mont.lion.1 mont.lion.1 unknown 32.84 unknown -117.25 9689 FD.0280 UCSD FALSE none 11166 FD.0280 fecal gut metagenome female Panthera leo 749906 Panthera leo FD.0280.lion gut sample ZU.18214.lemur TCGTCTGATATT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Garabola 18214 captive 10/31/14 Zurich Zoo Red ruffed lemur Varecia rubra Switzerland Zurich TRUE 193 healthy zurich.Garabola 32.84 adult -117.25 554167 ZU.18214 UCSD FALSE none 11166 ZU.18214 fecal gut metagenome female Varecia rubra 749906 Varecia rubra ZU.18214.lemur gut sample TS.083.pangolin TCTACGGCACGT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.083 none wild 7/28/14 Fred Delsuc Cape pangolin Manis temmincki South Africa South Africa TRUE 193 unknown TS.083 32.84 unknown -117.25 302418 TS.083 UCSD FALSE none 11166 TS.083 fecal gut metagenome unknown Manis temmincki 749906 Manis temminckii TS.083.pangolin gut sample ZU.18255.elephant TCTCCTAGGCGC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Indi 18255 captive 11/5/14 Zurich Zoo Asian elephant Elephas maximus Switzerland Zurich TRUE 193 healthy zurich.Indi 32.84 adult -117.25 9783 ZU.18255 UCSD FALSE none 11166 ZU.18255 fecal gut metagenome female Elephas maximus 749906 Elephas maximus ZU.18255.elephant gut sample TS.207.wilddog TCTTAAGATTTG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.207 none wild 8/1/14 Fred Delsuc African wild dog Lycaon pictus South Africa South Africa TRUE 193 unknown TS.207 32.84 unknown -117.25 9622 TS.207 UCSD FALSE none 11166 TS.207 fecal gut metagenome unknown Lycaon pictus 749906 Lycaon pictus TS.207.wilddog gut sample FD.0103.lion TGAAAGCGGCGA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Kid none captive 4/8/13 Toulon Zoo African lion Panthera leo France Delsuc TRUE 193 healthy toulon.Kid 32.84 subadult -117.25 9689 FD.0103 UCSD FALSE none 11166 FD.0103 fecal gut metagenome male Panthera leo 749906 Panthera leo FD.0103.lion gut sample FD.0078.eland TGACGAGGGCTG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 5/16/13 Montpellier Zoo Common eland Tragelaphus oryx France Delsuc TRUE 193 mont.eland.2 mont.eland.2 unknown 32.84 adult -117.25 9945 FD.0078 UCSD FALSE none 11166 FD.0078 fecal gut metagenome unknown Taurotragus oryx 749906 Taurotragus oryx FD.0078.eland gut sample FD.0142.loris TGGAATTCGGCT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 2845 none captive 4/17/14 Lille Zoo Pygmy slow loris Nycticebus pygmaeus France Delsuc TRUE 193 healthy lille.2845 32.84 adult -117.25 101278 FD.0142 UCSD FALSE none 11166 FD.0142 fecal gut metagenome female Nycticebus pygmaeus 749906 Nycticebus pygmaeus FD.0142.loris gut sample TS.129.pangolin TGGACTCAGCTA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.129 none wild 7/29/14 Fred Delsuc Cape pangolin Manis temmincki South Africa South Africa TRUE 193 unknown TS.129 32.84 unknown -117.25 302418 TS.129 UCSD FALSE none 11166 TS.129 intestinal gut metagenome unknown Manis temmincki 749906 Manis temminckii TS.129.pangolin gut sample FD.0090.aardvark TGGCCGTTACTG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none wild 11/23/13 TdR Nature Reserve Aardvark Orycteropus afer South Africa Delsuc TRUE 193 tdr.aardvark.4 tdr.aardvark.4 unknown 32.84 unknown -117.25 9818 FD.0090 UCSD FALSE none 11166 FD.0090 fecal gut metagenome unknown Orycteropus afer 749906 Orycteropus afer FD.0090.aardvark gut sample ZU.18203.leopard TGGTTTCGAAGA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 18203 captive 11/24/14 Zurich Zoo Snow leopard Panthera uncia Switzerland Zurich TRUE 193 healthy zurich.snowleopard.1 32.84 unknown -117.25 29064 ZU.18203 UCSD FALSE none 11166 ZU.18203 fecal gut metagenome unknown Panthera uncia 749906 Uncia uncia ZU.18203.leopard gut sample FD.0268.wilddog TGTATGCTTCTA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 6/11/13 Sigean African Reserve African wild dog Lycaon pictus France Delsuc TRUE 193 unknown sig.africanwilddog.1 32.84 unknown -117.25 9622 FD.0268 UCSD FALSE none 11166 FD.0268 fecal gut metagenome male Lycaon pictus 749906 Lycaon pictus FD.0268.wilddog gut sample FD.0008.bharal TGTTGCGTTTCT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 12/4/12 Montpellier Zoo Bharal Pseudois nayaur France Delsuc TRUE 193 mont.bharal.2 mont.bharal.2 unknown 32.84 adult -117.25 59542 FD.0008 UCSD FALSE none 11166 FD.0008 fecal gut metagenome unknown Pseudois nayaur 749906 Pseudois nayaur FD.0008.bharal gut sample FD.0019.antelope TTATACGTTGTA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 2/6/13 Montpellier Zoo Sable antelope Hippotragus niger France Delsuc TRUE 193 mont.sableantelope.1 mont.sableantelope.1 unknown 32.84 adult -117.25 37189 FD.0019 UCSD FALSE none 11166 FD.0019 fecal gut metagenome unknown Hippotragus niger 749906 Hippotragus niger FD.0019.antelope gut sample TS.090.nyala TTCACGCGCCCA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.090 none wild 7/28/14 Fred Delsuc Nyala Tragelaphus angasii South Africa South Africa TRUE 193 unknown TS.090 32.84 unknown -117.25 66437 TS.090 UCSD FALSE none 11166 TS.090 fecal gut metagenome unknown Tragelaphus angasii 749906 Tragelaphus angasii TS.090.nyala gut sample ZU.18252.tamandua TTCAGCGATGGT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 ZU.18252 18252 captive 10/28/14 Zurich Zoo Southern tamandua Tamandua tetradactyla Switzerland Zurich TRUE 193 healthy zurich.tamandua.1 32.84 unknown -117.25 48850 ZU.18252 UCSD FALSE none 11166 ZU.18252 fecal gut metagenome unknown Tamandua tetradactyla 749906 Tamandua tetradactyla ZU.18252.tamandua gut sample FD.0229.gibbon TTCCCACCCATT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 6/6/13 Sigean African Reserve Lar gibbon Hylobates lar France Delsuc TRUE 193 unknown sig.largibbon.1 32.84 unknown -117.25 9580 FD.0229 UCSD FALSE none 11166 FD.0229 fecal gut metagenome male Hylobates lar 749906 Hylobates lar FD.0229.gibbon gut sample TS.085.porcupine TTCCGAATCGGC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.085 none wild 7/28/14 Fred Delsuc Porcupine Hystrix africaeaustralis South Africa South Africa TRUE 193 unknown TS.085 32.84 unknown -117.25 10138 TS.085 UCSD FALSE none 11166 TS.085 fecal gut metagenome unknown Hystrix africaeaustralis 749906 Hystrix africaeaustralis TS.085.porcupine gut sample TS.078.mongoose TTGCGACAAAGT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.078 none wild 7/28/14 Fred Delsuc Yellow mongoose Cynictis penicillata South Africa South Africa TRUE 193 unknown TS.078 32.84 unknown -117.25 41010 TS.078 UCSD FALSE none 11166 TS.078 fecal gut metagenome unknown Cynictis penicillata 749906 Cynictis penicillata TS.078.mongoose gut sample FD.0014.addax TTGGAACGGCTT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 12/18/12 Montpellier Zoo Addax Addax nasomaculatus France Delsuc TRUE 193 mont.addax.2 mont.addax.2 unknown 32.84 adult -117.25 59515 FD.0014 UCSD FALSE none 11166 FD.0014 fecal gut metagenome unknown Addax nasomaculatus 749906 Addax nasomaculatus FD.0014.addax gut sample FD.0488.squirrel AACCGATGTACC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Group none captive 8/22/14 Beauval Zoopark Prevosts squirrel Callosciurus prevostii France Delsuc TRUE 193 healthy beau.prevostssquirrel.1 32.84 adult -117.25 64676 FD.0488 UCSD FALSE none 11166 FD.0488 fecal gut metagenome unknown Callosciurus prevostii 749906 Callosciurus prevostii FD.0488.squirrel gut sample FD.0438.lion AACGTCCTGTGC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 7/25/14 Beauval Zoopark African lion Panthera leo France Delsuc TRUE 193 beau.lion beau.lion.1 healthy 32.84 adult -117.25 9689 FD.0438 UCSD FALSE none 11166 FD.0438 fecal gut metagenome unknown Panthera leo 749906 Panthera leo FD.0438.lion gut sample FD.0499.fox AAGATTTGCAGC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 8/27/14 Beauval Zoopark Bateared fox Otocyon megalotis France Delsuc TRUE 193 healthy beau.batearedfox.1 32.84 adult -117.25 9624 FD.0499 UCSD FALSE none 11166 FD.0499 fecal gut metagenome unknown Otocyon megalotis 749906 Otocyon megalotis FD.0499.fox gut sample TS.049.springbok AAGCGTACATTG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.049 none wild 7/26/14 Fred Delsuc Springbok Antidorcas marsupialis South Africa South Africa TRUE 193 unknown TS.049 32.84 unknown -117.25 59523 TS.049 UCSD FALSE none 11166 TS.049 fecal gut metagenome unknown Antidorcas marsupialis 749906 Antidorcas marsupialis TS.049.springbok gut sample TS.051.springbok AAGGTGGACAAG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.051 none wild 7/26/14 Fred Delsuc Springbok Antidorcas marsupialis South Africa South Africa TRUE 193 unknown TS.051 32.84 unknown -117.25 59523 TS.051 UCSD FALSE none 11166 TS.051 fecal gut metagenome unknown Antidorcas marsupialis 749906 Antidorcas marsupialis TS.051.springbok gut sample TS.088.wildebeest AAGTGCTTGGTA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.088 none wild 7/28/14 Fred Delsuc Blue wildebeest Connochates taurinus South Africa South Africa TRUE 193 unknown TS.088 32.84 unknown -117.25 9927 TS.088 UCSD FALSE none 11166 TS.088 fecal gut metagenome unknown Connochates taurinus 749906 Connochaetes taurinus TS.088.wildebeest gut sample FD.0439.cougar ACAAGTGCTGCT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 7/25/14 Beauval Zoopark Cougar Puma concolor France Delsuc TRUE 193 healthy beau.cougar.1 32.84 adult -117.25 9696 FD.0439 UCSD FALSE none 11166 FD.0439 fecal gut metagenome unknown Puma concolor 749906 Puma concolor FD.0439.cougar gut sample SFM.18287.manatee ACAATCCCGAGT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Myakklemore-SFM11127 18287 captive 8/11/14 Marilyn Margold Florida manatee Trichechus manatus latirostris USA South Florida Museum TRUE 193 healthy SFM11127.Myakklemore 32.84 adult -117.25 127582 SFM.18287 UCSD FALSE none 11166 SFM.18287 fecal gut metagenome male Trichechus manatus latirostris 749906 Trichechus manatus SFM.18287.manatee gut sample FD.0244.tortoise ACCCTGGGTATC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 6/20/13 Sigean African Reserve Hermanns tortoise Testudo hermanni France Delsuc TRUE 193 unknown sig.hermannstortoise.1 32.84 juvenile -117.25 86976 FD.0244 UCSD FALSE none 11166 FD.0244 fecal gut metagenome unknown Testudo hermanni 749906 Testudo hermanni FD.0244.tortoise gut sample FD.0454.mara ACCGATTAGGTA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Group none captive 8/11/14 Beauval Zoopark Patagonian mara Dolichotis patagonum France Delsuc TRUE 193 beau.patagonianmara beau.patagonianmara.1 healthy 32.84 adult -117.25 29091 FD.0454 UCSD FALSE none 11166 FD.0454 fecal gut metagenome unknown Dolichotis patagonum 749906 Dolichotis patagonum FD.0454.mara gut sample FD.0463.meerkat ACGACCTACGCT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Group none captive 8/11/14 Beauval Zoopark Meerkat Suricata suricatta France Delsuc TRUE 193 beau.meerkat beau.meerkat.1 healthy 32.84 adult -117.25 37032 FD.0463 UCSD FALSE none 11166 FD.0463 fecal gut metagenome unknown Suricata suricatta 749906 Suricata suricatta FD.0463.meerkat gut sample TS.002.rhinoceros ACGCTCCCATCG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.002 none wild 7/24/14 Fred Delsuc White rhino Ceratotherium simum South Africa South Africa TRUE 193 unknown TS.002 32.84 unknown -117.25 9807 TS.002 UCSD FALSE none 11166 TS.002 fecal gut metagenome unknown Ceratotherium simum 749906 Ceratotherium simum TS.002.rhinoceros gut sample FD.0480.saki ACGGTGAAAGCG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Group none captive 8/18/14 Beauval Zoopark Whitefaced saki Pithecia pithecia France Delsuc TRUE 193 beau.whitefacedsaki beau.whitefacedsaki.1 healthy 32.84 unknown -117.25 43777 FD.0480 UCSD FALSE none 11166 FD.0480 fecal gut metagenome male Pithecia pithecia 749906 Pithecia pithecia FD.0480.saki gut sample TS.151.zebra AGACAAGCTTCC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.151 none wild 7/30/14 Fred Delsuc Plain zebra Equus burchellii South Africa South Africa TRUE 193 unknown TS.151 32.84 unknown -117.25 9790 TS.151 UCSD FALSE none 11166 TS.151 fecal gut metagenome unknown Equus burchellii 749906 Equus burchellii TS.151.zebra gut sample TS.157.gemsbok AGCCTGGTACCT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.157 none wild 7/30/14 Fred Delsuc Gemsbok Oryx gazella South Africa South Africa TRUE 193 unknown TS.157 32.84 unknown -117.25 9958 TS.157 UCSD FALSE none 11166 TS.157 fecal gut metagenome unknown Oryx gazella 749906 Oryx gazella TS.157.gemsbok gut sample TS.152.eland AGTTTGCGAGAT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.152 none wild 7/30/14 Fred Delsuc Eland Tragelaphus oryx South Africa South Africa TRUE 193 unknown TS.152 32.84 unknown -117.25 9945 TS.152 UCSD FALSE none 11166 TS.152 fecal gut metagenome unknown Tragelaphus oryx 749906 Taurotragus oryx TS.152.eland gut sample TS.040.warthog ATAAAGAGGAGG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.040 none wild 7/26/14 Fred Delsuc Warthog Phacochoerus africanus South Africa South Africa TRUE 193 unknown TS.040 32.84 unknown -117.25 41426 TS.040 UCSD FALSE none 11166 TS.040 fecal gut metagenome unknown Phacochoerus africanus 749906 Phacochoerus africanus TS.040.warthog gut sample TS.166.giraffe ATATACCTGCGG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.166 none wild 7/30/14 Fred Delsuc Giraffe Giraffa camelopardalis South Africa South Africa TRUE 193 unknown TS.166 32.84 unknown -117.25 9894 TS.166 UCSD FALSE none 11166 TS.166 fecal gut metagenome unknown Giraffa camelopardalis 749906 Giraffa camelopardalis TS.166.giraffe gut sample FD.0446.langur ATCACATTCTCC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Group none captive 8/7/14 Beauval Zoopark Northen plain gray langur Semnopithecus entellus France Delsuc TRUE 193 beau.graylangur beau.graylangur.1 healthy 32.84 unknown -117.25 88029 FD.0446 UCSD FALSE none 11166 FD.0446 fecal gut metagenome unknown Semnopithecus entellus 749906 Semnopithecus entellus FD.0446.langur gut sample ZU.18227.monitor ATCATCTCGGCG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 left 18227 captive 10/23/14 Zurich Zoo Blue tree monitor Varanus macraei Switzerland Zurich TRUE 193 healthy zurich.bluetreemonitor.1 32.84 unknown -117.25 437655 ZU.18227 UCSD FALSE none 11166 ZU.18227 fecal gut metagenome unknown Varanus macraei 749906 Varanus macraei ZU.18227.monitor gut sample FD.0469.macaque ATCGATCCACAG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Group none captive 8/18/14 Beauval Zoopark Liontailed macaque Macaca silenus France Delsuc TRUE 193 beau.liontailedmacaque beau.liontailedmacaque.1 healthy 32.84 adult -117.25 54601 FD.0469 UCSD FALSE none 11166 FD.0469 fecal gut metagenome unknown Macaca silenus 749906 Macaca silenus FD.0469.macaque gut sample ZU.18262.iguana ATGCAACTCGAA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 ZU.18262 18262 captive 10/23/14 Zurich Zoo Green iguana Iguana iguana Switzerland Zurich TRUE 193 healthy zurich.greeniguana.1 32.84 unknown -117.25 8517 ZU.18262 UCSD FALSE none 11166 ZU.18262 fecal gut metagenome unknown Iguana iguana 749906 Iguana iguana ZU.18262.iguana gut sample FD.0453.nilgai ATGGCCTGACTA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Group none captive 8/11/14 Beauval Zoopark Nilgai Boselaphus tragocamelus France Delsuc TRUE 193 beau.nilgai beau.nilgai.1 healthy 32.84 adult -117.25 9917 FD.0453 UCSD FALSE none 11166 FD.0453 fecal gut metagenome unknown Boselaphus tragocamelus 749906 Boselaphus tragocamelus FD.0453.nilgai gut sample FD.0478.tamarin ATTAATGAAGCG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Group none captive 8/18/14 Beauval Zoopark Cottontop tamarin Saguinus oedipus France Delsuc TRUE 193 beau.cottontoptamarin beau.cottontoptamarin.1 unknown 32.84 unknown -117.25 9490 FD.0478 UCSD FALSE none 11166 FD.0478 fecal gut metagenome unknown Saguinus oedipus 749906 Saguinus oedipus FD.0478.tamarin gut sample TS.142.kudu CAATATTCAATA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.142 none wild 7/30/14 Fred Delsuc Kudu Tragelaphus strepsiceros South Africa South Africa TRUE 193 unknown TS.142 32.84 unknown -117.25 9946 TS.142 UCSD FALSE etoh 11166 TS.142 fecal gut metagenome unknown Tragelaphus strepsiceros 749906 Tragelaphus strepsiceros TS.142.kudu gut sample FD.0501.springbok CACCTCCAAGGT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 019 jaune none captive 9/2/14 Beauval Zoopark Springbok Antidorcas marsupialis France Delsuc TRUE 193 diseased beau.019jaune 32.84 adult -117.25 59523 FD.0501 UCSD FALSE none 11166 FD.0501 fecal gut metagenome female Antidorcas marsupialis 749906 Antidorcas marsupialis FD.0501.springbok gut sample FD.0500.meerkat CACTCTCCGGCA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Group none captive 8/27/14 Beauval Zoopark Meerkat Suricata suricatta France Delsuc TRUE 193 beau.meerkat beau.meerkat.1 healthy 32.84 adult -117.25 37032 FD.0500 UCSD FALSE none 11166 FD.0500 fecal gut metagenome unknown Suricata suricatta 749906 Suricata suricatta FD.0500.meerkat gut sample SFM.18281.manatee CACTTGCTCTCT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Myakklemore-SFM11127 18281 captive 8/11/14 Marilyn Margold Florida manatee Trichechus manatus latirostris USA South Florida Museum TRUE 193 healthy SFM11127.Myakklemore 32.84 adult -117.25 127582 SFM.18281 UCSD FALSE none 11166 SFM.18281 fecal gut metagenome male Trichechus manatus latirostris 749906 Trichechus manatus SFM.18281.manatee gut sample ZU.18223.gecko CATCCTGAGCAA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 quarantine 18223 captive 10/31/14 Zurich Zoo New Caledonian giant gecko Rhacodactylus leachianus Switzerland Zurich TRUE 193 healthy zurich.gecko.1 32.84 unknown -117.25 95122 ZU.18223 UCSD FALSE none 11166 ZU.18223 fecal gut metagenome male Rhacodactylus leachianus 749906 Rhacodactylus leachianus ZU.18223.gecko gut sample FD.0460.okapi CATGAGACTGTA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Ann none captive 8/11/14 Beauval Zoopark Okapi Okapia johnstoni France Delsuc TRUE 193 healthy beau.Ann 32.84 adult -117.25 86973 FD.0460 UCSD FALSE none 11166 FD.0460 fecal gut metagenome female Okapia johnstoni 749906 Okapia johnstoni FD.0460.okapi gut sample FD.0481.monkey CCAGGGACTTCT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Group none captive 8/18/14 Beauval Zoopark Blackheaded spider monkey Ateles fusciceps robustus France Delsuc TRUE 193 beau.blackheadedspidermonkey beau.blackheadedspidermonkey.1 healthy 32.84 unknown -117.25 183327 FD.0481 UCSD FALSE none 11166 FD.0481 fecal gut metagenome unknown Ateles fusciceps robustus 749906 Ateles fusciceps FD.0481.monkey gut sample TS.159.antelope CCGAGTACAATC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.159 none wild 7/30/14 Fred Delsuc Sable antelope Hippotragus niger South Africa South Africa TRUE 193 unknown TS.159 32.84 unknown -117.25 37189 TS.159 UCSD FALSE none 11166 TS.159 fecal gut metagenome unknown Hippotragus niger 749906 Hippotragus niger TS.159.antelope gut sample TS.176.zebra CCTGGTGTCCGT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.176 none wild 7/31/14 Fred Delsuc Mountain zebra Equus zebra hartmannae South Africa South Africa TRUE 193 unknown TS.176 32.84 unknown -117.25 73335 TS.176 UCSD FALSE none 11166 TS.176 fecal gut metagenome unknown Equus zebra hartmannae 749906 Equus zebra TS.176.zebra gut sample FD.0496.deer CGAGTATACAAC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 8/27/14 Beauval Zoopark Indian hog deer Axis porcinus France Delsuc TRUE 193 beau.indianhogdeer beau.indianhogdeer.1 healthy 32.84 adult -117.25 57737 FD.0496 UCSD FALSE none 11166 FD.0496 fecal gut metagenome female Hyelaphus porcinus 749906 Axis porcinus FD.0496.deer gut sample FD.0437.hyena CGTAAGATGCCT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 7/25/14 Beauval Zoopark Spotted hyena Crocuta crocuta France Delsuc TRUE 193 beau.spottedhyena beau.spottedhyena.1 healthy 32.84 adult -117.25 9678 FD.0437 UCSD FALSE none 11166 FD.0437 fecal gut metagenome unknown Crocuta crocuta 749906 Crocuta crocuta FD.0437.hyena gut sample FD.0431.raccoon CTAAATACCCTT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 7/23/14 Beauval Zoopark Raccoon Procyon lotor France Delsuc TRUE 193 healthy beau.raccoon.1 32.84 adult -117.25 9654 FD.0431 UCSD FALSE none 11166 FD.0431 fecal gut metagenome unknown Procyon lotor 749906 Procyon lotor FD.0431.raccoon gut sample TS.050.springbok CTAATATTTGAA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.050 none wild 7/26/14 Fred Delsuc Springbok Antidorcas marsupialis South Africa South Africa TRUE 193 unknown TS.050 32.84 unknown -117.25 59523 TS.050 UCSD FALSE none 11166 TS.050 fecal gut metagenome unknown Antidorcas marsupialis 749906 Antidorcas marsupialis TS.050.springbok gut sample ZU.18236.gecko CTCAGGAGACTT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 kitchen 18236 captive 10/23/14 Zurich Zoo New Caledonian giant gecko Rhacodactylus leachianus Switzerland Zurich TRUE 193 healthy zurich.gecko.2 32.84 unknown -117.25 95122 ZU.18236 UCSD FALSE none 11166 ZU.18236 fecal gut metagenome male Rhacodactylus leachianus 749906 Rhacodactylus leachianus ZU.18236.gecko gut sample TS.059.wildebeest CTCCTGTCCGGA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.059 none wild 7/27/14 Fred Delsuc Blue wildebeest Connochates taurinus South Africa South Africa TRUE 193 unknown TS.059 32.84 unknown -117.25 9927 TS.059 UCSD FALSE none 11166 TS.059 fecal gut metagenome unknown Connochates taurinus 749906 Connochaetes taurinus TS.059.wildebeest gut sample TS.063.kudu CTGTTACAGCGA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.063 none wild 7/27/14 Fred Delsuc Kudu Tragelaphus strepsiceros South Africa South Africa TRUE 193 unknown TS.063 32.84 unknown -117.25 9946 TS.063 UCSD FALSE none 11166 TS.063 fecal gut metagenome unknown Tragelaphus strepsiceros 749906 Tragelaphus strepsiceros TS.063.kudu gut sample FD.0489.squirrel CTTCGCGGATGT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 8/22/14 Beauval Zoopark Richardsons ground squirrel Urocitellus richardsonii France Delsuc TRUE 193 beau.groundsquirrel beau.groundsquirrel.1 healthy 32.84 adult -117.25 37591 FD.0489 UCSD FALSE none 11166 FD.0489 fecal gut metagenome male Spermophilus richardsonii 749906 Urocitellus richardsonii FD.0489.squirrel gut sample TS.161.antelope CTTTATGTGTCA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.161 none wild 7/30/14 Fred Delsuc Sable antelope Hippotragus niger South Africa South Africa TRUE 193 unknown TS.161 32.84 unknown -117.25 37189 TS.161 UCSD FALSE none 11166 TS.161 fecal gut metagenome unknown Hippotragus niger 749906 Hippotragus niger TS.161.antelope gut sample FD.0216.python GACAATTCCGAA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 4/9/13 Sigean African Reserve Royal python Python regius France Delsuc TRUE 193 unknown sig.royalpython.1 32.84 unknown -117.25 51751 FD.0216 UCSD FALSE none 11166 FD.0216 fecal gut metagenome unknown Python regius 749906 Python regius FD.0216.python gut sample FD.0456.mongoose GACCATGTAGTA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Group none captive 8/11/14 Beauval Zoopark Ethiopian dwarf mangoose Helogale hirtula France Delsuc TRUE 193 healthy beau.ethiopiandwarfmongoose.1 32.84 adult -117.25 210646 FD.0456 UCSD FALSE none 11166 FD.0456 fecal gut metagenome unknown Helogale hirtula 749906 Helogale hirtula FD.0456.mongoose gut sample TS.065.baboon GAGCATTACATG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.065 none wild 7/27/14 Fred Delsuc Chacma baboon Papio hamadryas South Africa South Africa TRUE 193 unknown TS.065 32.84 unknown -117.25 9557 TS.065 UCSD FALSE none 11166 TS.065 fecal gut metagenome unknown Papio hamadryas 749906 Papio hamadryas TS.065.baboon gut sample FD.0487.panda GAGGTATTCTGA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Yuan Zi none captive 8/22/14 Beauval Zoopark Giant panda Ailuropoda melanoleuca France Delsuc TRUE 193 healthy beau.YuanZi 32.84 adult -117.25 9646 FD.0487 UCSD FALSE none 11166 FD.0487 fecal gut metagenome male Ailuropoda melanoleuca 749906 Ailuropoda melanoleuca FD.0487.panda gut sample FD.0458.elephant GCAAGCTGTCTC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Limbo none captive 8/11/14 Beauval Zoopark African elephant Loxodonta africana France Delsuc TRUE 193 healthy beau.Limbo 32.84 adult -117.25 9785 FD.0458 UCSD FALSE none 11166 FD.0458 fecal gut metagenome male Loxondonta africana 749906 Loxodonta africana FD.0458.elephant gut sample FD.0444.gorilla GCCTTACGATAG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Kuimba none captive 8/5/14 Beauval Zoopark Western lowland gorilla Gorilla gorilla gorilla France Delsuc TRUE 193 healthy beau.Kuimba 32.84 juvenile -117.25 9595 FD.0444 UCSD FALSE none 11166 FD.0444 fecal gut metagenome female Gorilla gorilla gorilla 749906 Gorilla gorilla FD.0444.gorilla gut sample TS.031.cheetah GCGGAGCACGTC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.031 none wild 7/25/14 Fred Delsuc Cheetah Acinonyx jubatus South Africa South Africa TRUE 193 unknown TS.031 32.84 unknown -117.25 32536 TS.031 UCSD FALSE none 11166 TS.031 fecal gut metagenome unknown Acinonyx jubatus 749906 Acinonyx jubatus TS.031.cheetah gut sample TS.032.cheetah GCGTACGGGTGA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.032 none wild 7/25/14 Fred Delsuc Cheetah Acinonyx jubatus South Africa South Africa TRUE 193 unknown TS.032 32.84 unknown -117.25 32536 TS.032 UCSD FALSE none 11166 TS.032 fecal gut metagenome unknown Acinonyx jubatus 749906 Acinonyx jubatus TS.032.cheetah gut sample FD.0482.colobus GCTTATTGCTTA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Group none captive 8/18/14 Beauval Zoopark Black and white colobus Colobus guereza France Delsuc TRUE 193 beau.bwcolobus beau.bwcolobus.1 healthy 32.84 unknown -117.25 33548 FD.0482 UCSD FALSE none 11166 FD.0482 fecal gut metagenome unknown Colobus guereza 749906 Colobus guereza FD.0482.colobus gut sample FD.0055.tortoise GGAAGCTTAACT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 3/29/13 Sigean African Reserve African spurred tortoise Centrochelys sulcata France Delsuc TRUE 193 healthy sig.africanspurredtortoise.1 32.84 juvenile -117.25 1540822 FD.0055 UCSD FALSE none 11166 FD.0055 fecal gut metagenome unknown Geochelone sulcata 749906 Centrochelys sulcata FD.0055.tortoise gut sample FD.0457.lechwe GGAGGGTACCGT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Group none captive 8/11/14 Beauval Zoopark Lechwe Kobus leche France Delsuc TRUE 193 healthy beau.lechwe.1 32.84 adult -117.25 59531 FD.0457 UCSD FALSE none 11166 FD.0457 fecal gut metagenome unknown Kobus leche 749906 Kobus leche FD.0457.lechwe gut sample TS.057.warthog GGTACTGTACCA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.057 none wild 7/27/14 Fred Delsuc Warthog Phacochoerus africanus South Africa South Africa TRUE 193 unknown TS.057 32.84 unknown -117.25 41426 TS.057 UCSD FALSE none 11166 TS.057 fecal gut metagenome unknown Phacochoerus africanus 749906 Phacochoerus africanus TS.057.warthog gut sample TS.149.zebra GGTCCCGAAATT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.149 none wild 7/30/14 Fred Delsuc Plain zebra Equus burchellii South Africa South Africa TRUE 193 unknown TS.149 32.84 unknown -117.25 9790 TS.149 UCSD FALSE none 11166 TS.149 fecal gut metagenome unknown Equus burchellii 749906 Equus burchellii TS.149.zebra gut sample TS.038.warthog GGTCGAATTGCT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.038 none wild 7/26/14 Fred Delsuc Warthog Phacochoerus africanus South Africa South Africa TRUE 193 unknown TS.038 32.84 unknown -117.25 41426 TS.038 UCSD FALSE none 11166 TS.038 fecal gut metagenome unknown Phacochoerus africanus 749906 Phacochoerus africanus TS.038.warthog gut sample ZU.18193.pitviper GTCTATACATAT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 quarantine 18193 captive 11/8/14 Zurich Zoo Eyelash pitviper Bothriechis schlegelii Switzerland Zurich TRUE 193 healthy zurich.pitviper.1 32.84 unknown -117.25 44725 ZU.18193 UCSD FALSE none 11166 ZU.18193 fecal gut metagenome female Bothriechis schlegelii 749906 Bothriechis schlegelii ZU.18193.pitviper gut sample ZU.18259.gecko GTGACTAGTGAT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 background 18259 captive 10/23/14 Zurich Zoo New Caledonian giant gecko Rhacodactylus leachianus Switzerland Zurich TRUE 193 healthy zurich.gecko.3 32.84 unknown -117.25 95122 ZU.18259 UCSD FALSE none 11166 ZU.18259 fecal gut metagenome male Rhacodactylus leachianus 749906 Rhacodactylus leachianus ZU.18259.gecko gut sample TS.146.rhinoceros GTGTGCTAACGT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.146 none wild 7/30/14 Fred Delsuc White rhino Ceratotherium simum South Africa South Africa TRUE 193 unknown TS.146 32.84 unknown -117.25 9807 TS.146 UCSD FALSE none 11166 TS.146 fecal gut metagenome unknown Ceratotherium simum 749906 Ceratotherium simum TS.146.rhinoceros gut sample SFM.18277.manatee GTTCCCAACGGT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Ace-SFM11128 18277 captive 8/11/14 Marilyn Margold Florida manatee Trichechus manatus latirostris USA South Florida Museum TRUE 193 healthy SFM11128.Ace 32.84 adult -117.25 127582 SFM.18277 UCSD FALSE none 11166 SFM.18277 fecal gut metagenome male Trichechus manatus latirostris 749906 Trichechus manatus SFM.18277.manatee gut sample TS.163.antelope GTTGTATTATAC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.163 none wild 7/30/14 Fred Delsuc Sable antelope Hippotragus niger South Africa South Africa TRUE 193 unknown TS.163 32.84 unknown -117.25 37189 TS.163 UCSD FALSE none 11166 TS.163 fecal gut metagenome unknown Hippotragus niger 749906 Hippotragus niger TS.163.antelope gut sample FD.0486.gorilla TAAGCGTCTCGA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Asato none captive 8/21/14 Beauval Zoopark Western lowland gorilla Gorilla gorilla gorilla France Delsuc TRUE 193 healthy beau.Asato 32.84 adult -117.25 9595 FD.0486 UCSD FALSE none 11166 FD.0486 fecal gut metagenome male Gorilla gorilla gorilla 749906 Gorilla gorilla FD.0486.gorilla gut sample TS.069.porcupine TACGTTTGGCGA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.069 none wild 7/27/14 Fred Delsuc Porcupine Hystrix africaeaustralis South Africa South Africa TRUE 193 unknown TS.069 32.84 unknown -117.25 10138 TS.069 UCSD FALSE none 11166 TS.069 fecal gut metagenome unknown Hystrix africaeaustralis 749906 Hystrix africaeaustralis TS.069.porcupine gut sample FD.0475.tamarin TACTAGATATTA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Group none captive 8/18/14 Beauval Zoopark Golden lion tamarin Leontopithecus rosalia France Delsuc TRUE 193 healthy beau.gltamarin.1 32.84 unknown -117.25 30588 FD.0475 UCSD FALSE none 11166 FD.0475 fecal gut metagenome unknown Leontopithecus rosalia 749906 Leontopithecus rosalia FD.0475.tamarin gut sample TS.003.rhinoceros TATAATCCGAGG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.003 none wild 7/24/14 Fred Delsuc White rhino Ceratotherium simum South Africa South Africa TRUE 193 unknown TS.003 32.84 unknown -117.25 9807 TS.003 UCSD FALSE none 11166 TS.003 fecal gut metagenome unknown Ceratotherium simum 749906 Ceratotherium simum TS.003.rhinoceros gut sample TS.061.gemsbok TATAGAAGAATG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.061 none wild 7/27/14 Fred Delsuc Gemsbok Oryx gazella South Africa South Africa TRUE 193 unknown TS.061 32.84 unknown -117.25 9958 TS.061 UCSD FALSE none 11166 TS.061 fecal gut metagenome unknown Oryx gazella 749906 Oryx gazella TS.061.gemsbok gut sample FD.0440.jaguar TATCTTCCTGAA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 7/26/14 Beauval Zoopark Jaguar Panthera onca France Delsuc TRUE 193 healthy beau.jaguar.1 32.84 adult -117.25 9690 FD.0440 UCSD FALSE none 11166 FD.0440 fecal gut metagenome unknown Panthera onca 749906 Panthera onca FD.0440.jaguar gut sample FD.0502.gorilla TCAAGATCAAGA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Inge none captive 9/3/14 Beauval Zoopark Western lowland gorilla Gorilla gorilla gorilla France Delsuc TRUE 193 healthy beau.Inge 32.84 adult -117.25 9595 FD.0502 UCSD FALSE none 11166 FD.0502 fecal gut metagenome female Gorilla gorilla gorilla 749906 Gorilla gorilla FD.0502.gorilla gut sample FD.0425.lutung TCAATGACCGCA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 none captive 7/18/14 Beauval Zoopark Javan lutung Trachypithecus auratus France Delsuc TRUE 193 beau.javanlutung beau.javanlutung.1 healthy 32.84 unknown -117.25 222416 FD.0425 UCSD FALSE none 11166 FD.0425 fecal gut metagenome unknown Trachypithecus auratus 749906 Trachypithecus auratus FD.0425.lutung gut sample ZU.18231.monitor TCATGTGAACGA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 right 18231 captive 10/23/14 Zurich Zoo Blue tree monitor Varanus macraei Switzerland Zurich TRUE 193 healthy zurich.bluetreemonitor.2 32.84 unknown -117.25 437655 ZU.18231 UCSD FALSE none 11166 ZU.18231 fecal gut metagenome unknown Varanus macraei 749906 Varanus macraei ZU.18231.monitor gut sample FD.0428.springbok TGAGCGCACGCG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 014 yellow none captive 7/21/14 Beauval Zoopark Springbok Antidorcas marsupialis France Delsuc TRUE 193 diseased beau.014yellow 32.84 adult -117.25 59523 FD.0428 UCSD FALSE none 11166 FD.0428 fecal gut metagenome male Antidorcas marsupialis 749906 Antidorcas marsupialis FD.0428.springbok gut sample TS.005.jackal TGAGTTCGGTCC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.005 none wild 7/25/14 Fred Delsuc Blackbacked jackal Canis mesomelas South Africa South Africa TRUE 193 unknown TS.005 32.84 unknown -117.25 68725 TS.005 UCSD FALSE none 11166 TS.005 fecal gut metagenome unknown Canis mesomelas 749906 Canis mesomelas TS.005.jackal gut sample FD.0494.antelope TGCAACTTGCAG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Group none captive 8/24/14 Beauval Zoopark Sable antelope Hippotragus niger France Delsuc TRUE 193 beau.sableantelope beau.sableantelope.1 healthy 32.84 adult -117.25 37189 FD.0494 UCSD FALSE none 11166 FD.0494 fecal gut metagenome unknown Hippotragus niger 749906 Hippotragus niger FD.0494.antelope gut sample TS.168.impala TGGCATGTTGGT GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.168 none wild 7/30/14 Fred Delsuc Impala Aepyceros melampus South Africa South Africa TRUE 193 unknown TS.168 32.84 unknown -117.25 9897 TS.168 UCSD FALSE none 11166 TS.168 fecal gut metagenome unknown Aepyceros melampus 749906 Aepyceros melampus TS.168.impala gut sample FD.0493.wildebeest TGGGACATATCC GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Group none captive 8/24/14 Beauval Zoopark Blue wildbeest Connochaetes taurinus France Delsuc TRUE 193 beau.bluewildbeest beau.bluewildbeest.1 healthy 32.84 adult -117.25 9927 FD.0493 UCSD FALSE none 11166 FD.0493 fecal gut metagenome unknown Connochaetes taurinus 749906 Connochaetes taurinus FD.0493.wildebeest gut sample TS.067.porcupine TTACCACATCTA GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 TS.067 none wild 7/27/14 Fred Delsuc Porcupine Hystrix africaeaustralis South Africa South Africa TRUE 193 unknown TS.067 32.84 unknown -117.25 10138 TS.067 UCSD FALSE none 11166 TS.067 fecal gut metagenome unknown Hystrix africaeaustralis 749906 Hystrix africaeaustralis TS.067.porcupine gut sample FD.0491.koala TTACCCGCACAG GTGTGCCAGCMGCCGCGGTAA UCSDMI Samples of fecal material from vertebrates Illumina HiSeq Illumina HiSeq 515fbc, 806r amplification of 16SrRNA V4 GT FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT Illumina lane2_Undetermined_L002 Sequencing by synthesis 16S rRNA V4 4936 Group none captive 8/22/14 Beauval Zoopark Koala Phascolarctos cinereus France Delsuc TRUE 193 beau.koala beau.koala.1 healthy 32.84 adult -117.25 38626 FD.0491 UCSD FALSE none 11166 FD.0491 fecal gut metagenome unknown Phascolarctos cinereus 749906 Phascolarctos cinereus FD.0491.koala gut sample