Topics tagged feature-table

Topic	Replies	Views	Activity
Feature table - Sample ID column Technical Support feature-table	3	30	April 24, 2024
Creating feature table without using Dada2 and/or deblur User Support feature-table	1	42	April 10, 2024
Filter specific ASVs from feature table User Support filtering , feature-table	2	80	April 20, 2024
2024.2 bug(?) in feature-table summary output User Support feature-table	2	66	April 7, 2024
Cannot read biom file and feature detail Other Bioinformatics Tools feature-table , phyloseq	7	87	April 6, 2024
feature-table filter-features User Support feature-table	10	167	March 25, 2024
qiime vsearch cluster-features-open-reference issue User Support feature-table , phylogeny , vsearch , qiime2	20	230	March 18, 2024
Odds sequence in Table User Support dada2 , import , feature-table	6	126	March 7, 2024
ANCOM Analysis with Filtered FeatureTable User Support feature-table , ancom	2	82	March 3, 2024
how to decide feature tabel filtering min,max and sampling depth values User Support feature-table , filter-features	2	85	February 29, 2024
Questions Regarding Determining Original Read Names and Identifying Reads Clustered into Representative Sequences in QIIME2 User Support feature-table	3	123	February 27, 2024
can someone help me to decide in denoising this paired end sequence User Support dada2 , feature-table	6	125	February 27, 2024
Matching the feature ID to sample ID of metadata Technical Support feature-table	7	146	February 23, 2024
Abnormal high percentage of unclassified bacteria User Support dada2 , filtering , demux , feature-classifier , taxonomy , feature-table , diversity	2	207	February 12, 2024
Dada2 Stats: low sample frequency, non-chimeric reads, and merged metrics User Support dada2 , feature-table	6	286	February 5, 2024
Manually Adding Positive Controls to classifier or reference database General Discussion taxonomy , feature-table , rescript	1	426	December 29, 2023
How to explain the table results after dada2 denoise-paired User Support dada2 , feature-table	3	163	January 29, 2024
Heatmaps- Plugin error from feature-table: Technical Support import , feature-table , heatmap	4	125	January 1, 2024
How could I combined featuure table and taxamony for Enterotype identification? Technical Support taxonomy , feature-table	9	223	December 28, 2023
Is my command right for classifying ? (I changed my classifier command to use q2-feature-classifier) General Discussion r , feature-classifier , taxonomy , feature-table	4	269	November 22, 2023
Convert qza file to xls or csv User Support export , feature-table	5	837	December 14, 2023
Distance metric wanted for ranked sets with missing values (beta diversity metric) General Discussion feature-table , diversity	2	213	November 10, 2023
Frequency per feature is 1 - each read is being considered as unique feature Technical Support feature-classifier , feature-table , vsearch	10	215	December 9, 2023
Feature table export to BIOM User Support export , feature-table	4	143	December 4, 2023
Greengenes2 database methods, which one to use? User Support feature-classifier , taxonomy , feature-table , greengenes2	9	556	November 26, 2023
Filepath on line 3 and column "forward-absolute-filepath" could not be found error Technical Support import , feature-table	3	183	November 11, 2023
.table format conversion to .csv Other Bioinformatics Tools import , feature-table	0	166	September 21, 2023
Can feature IDs be used to compare across different studies? User Support feature-table	2	157	October 13, 2023
Biom add txonomy not working User Support taxonomy , feature-table	2	149	October 12, 2023
Features filter out that belong to the represent OTUs General Discussion feature-classifier , feature-table	1	168	August 31, 2023