|
Different OTU identifiers between rep-seqs and feature table files
|
|
5
|
691
|
July 18, 2021
|
|
What could do if NCBI-SRA data don't have information about region, primers, barcodes?
|
|
2
|
692
|
July 2, 2021
|
|
need some help with vsearch open reference
|
|
6
|
1281
|
June 4, 2021
|
|
Lose many reads after running cut-adapt and join-pairs
|
|
6
|
1154
|
May 20, 2021
|
|
An error was encountered while running qiime feature-table filter-seqs
|
|
3
|
642
|
May 11, 2021
|
|
Passing ASVs into vsearch for Ghost Tree Analysis
|
|
4
|
670
|
March 15, 2021
|
|
lost all most all the sequence during Vsearch join-pairs command
|
|
2
|
592
|
March 8, 2021
|
|
vsearch open-reference pipeline and phylogenetic tree
|
|
6
|
1249
|
November 27, 2020
|
|
OTU picking with DADA2 input
|
|
3
|
1079
|
September 25, 2020
|
|
About joining paired reads and quality control
|
|
4
|
1920
|
September 12, 2020
|
|
TypeError while running vsearch join-pairs
|
|
3
|
450
|
September 11, 2020
|
|
Trimming and joining short reads resulted in few merged read on v4 region
|
|
6
|
1793
|
September 4, 2020
|
|
Question about q2-ghost-tree
|
|
3
|
828
|
July 24, 2020
|
|
Clustering the ASVs into OTUs at 98% identity
|
|
3
|
1288
|
July 23, 2020
|
|
plugin error from vsearch: list index out of range
|
|
2
|
772
|
July 16, 2020
|
|
Error when using Vsearch dereplicate
|
|
12
|
1514
|
May 15, 2020
|
|
qiime2 OTU picking with hundreds of samples
|
|
36
|
2900
|
March 12, 2020
|
|
Steps for taxonomy assignment on dual-indexed sequence data generated by QIIME 1.9
|
|
4
|
733
|
March 22, 2020
|
|
hundreds of samples vsearch OTU
|
|
2
|
528
|
January 18, 2020
|
|
Question about vsearch dereplicate
|
|
4
|
2967
|
February 9, 2020
|
|
vsearch index error
|
|
2
|
693
|
December 5, 2019
|
|
vsearch closed reference OTU picking error: No matches were identified to reference_sequences
|
|
4
|
1172
|
November 17, 2019
|
|
using database indexing for vsearch
|
|
10
|
1805
|
November 4, 2019
|
|
Vsearch plugin error for close reference classification
|
|
3
|
565
|
November 4, 2019
|
|
Dada2: Losing reads at merging step
|
|
2
|
676
|
October 28, 2019
|
|
How to retain 'Unmatched' features in barplots (as 'Unassigned') ?
|
|
6
|
2005
|
November 23, 2019
|
|
Unmatched sequences percentage from vsearch
|
|
4
|
1064
|
November 22, 2019
|
|
vsearch clustering and feature classifiers
|
|
3
|
867
|
October 28, 2019
|
|
plugin error from vsearch: No matches were identified to reference_sequences.
|
|
15
|
1551
|
July 21, 2019
|
|
Yet another question regarding OTU clustering
|
|
10
|
1101
|
March 29, 2019
|
