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Error when collapsing at genus level: Feature IDs missing from taxonomy
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3
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66
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September 24, 2025
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Importing Taxonomy into Qiime2
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7
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210
|
September 18, 2025
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ABI reads with Ns: OTUs & classification
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3
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160
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September 13, 2025
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How to account for uneven sampling
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2
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113
|
August 9, 2025
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16S SRNA
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1
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104
|
August 2, 2025
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Merging qiime2 sample metadata with exterior taxonomic classifications
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1
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63
|
July 13, 2025
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Analysis of 16S data from different regions using q2-fragment-insertion or other substitution
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2
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74
|
July 10, 2025
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Greengenes2 and RESCRIPt
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2
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160
|
July 9, 2025
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PICRUST2 Input Data setting
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1
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181
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July 8, 2025
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Dealing with Poor Taxonomic Assignments
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6
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199
|
June 24, 2025
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Processing, filtering, and evaluating the SILVA database (and other reference sequence data) with RESCRIPt
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8
|
66453
|
February 17, 2023
|
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classify-sklearn vs classify-consensus-vsearch - classification depth
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2
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176
|
June 13, 2025
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Shotgun sequencing of Fungi - UNITE or KRAKEN2
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1
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139
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June 11, 2025
|
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Minimum length of read in ASV (DADA2)
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5
|
192
|
June 8, 2025
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Difficulty assigning taxonomy to cyanobacterial ASVs
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2
|
105
|
June 5, 2025
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Classify the phylum of d__Eukaryota;__
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4
|
145
|
May 21, 2025
|
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mismatch between taxonomy and sequence data that download from NCBI using qiime rescript get-ncbi-data
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3
|
73
|
May 19, 2025
|
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how to select samples using stacked barplot
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2
|
75
|
May 7, 2025
|
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RESCRIPt GTDB 226.0
|
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2
|
175
|
May 5, 2025
|
|
Greengenes2 2024.09 phylogenetic tree
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|
6
|
370
|
May 2, 2025
|
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Almost all Reads are unclassified - custom 18S V4 classifier
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|
12
|
263
|
April 25, 2025
|
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SILVA 138.2 genus names with strain code
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3
|
148
|
April 24, 2025
|
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taxonomy mitochondria vs D_4__Mitochondria
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2
|
73
|
April 22, 2025
|
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QIIME 2 Meta-Analysis of Rhizosphere Microbiome with Mixed V3-V4/V4 Data: Best Practices for Downstream Analysis
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|
13
|
544
|
April 17, 2025
|
|
Rescript get-ncbi-data MemoryError
|
|
5
|
102
|
April 13, 2025
|
|
biom add-metadata: Error in biom file while adding Taxonomy
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|
3
|
64
|
April 7, 2025
|
|
alpha and beta diversity
|
|
2
|
99
|
April 6, 2025
|
|
Specific taxa abundance
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4
|
114
|
April 2, 2025
|
|
low proportion of identified ITS - OTU features
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|
2
|
111
|
March 28, 2025
|
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Why do we get higher species level assignment with an older GTDB classifier than with a more recent one?
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|
8
|
321
|
March 27, 2025
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