Topics tagged paired-end

Topic	Replies	Views	Activity
Losing a ton of reads post demultiplexing with cutadept paired end User Support demux , paired-end , cutadapt	11	1442	May 11, 2020
Cutadapt prior to dada2 denoise-paired User Support dada2 , paired-end , quality-control	7	1907	April 21, 2020
Error Denoising Paired End Reads User Support paired-end	6	807	April 14, 2020
Denoising of Paired End Reads Technical Support dada2 , paired-end	16	3022	February 7, 2020
Amplicon size is longer than paired end read length General Discussion paired-end	6	1442	November 12, 2019
(Help) Beginner Advice/Guidance for Importing Paired-End Reads User Support import , multiplexed , paired-end	5	1861	November 9, 2019
dada2 paired end denoising max overlapping base User Support dada2 , paired-end , truncate	2	736	November 1, 2019
Alpha and beta diversity analysis without sample-metadata.tsv User Support metadata , core-metrics , miseq , beta , paired-end , alpha	2	1157	July 29, 2019
merging R1 and R2 reads with mixed-orientation files User Support dada2 , paired-end , joining	4	3687	July 11, 2019
Unable to import paired end sequence data in the moving pictures tutorial in Qiime 2 User Support import , paired-end , moving-pictures	5	1135	March 22, 2019
Error while Importing Paired End Data User Support paired-end	4	666	December 4, 2018
Demultiplex joined reads sequences User Support demux , paired-end	5	3200	September 27, 2018
Losing almost all reads after running deblur on paired-end sequences User Support deblur , paired-end	9	3590	August 21, 2018
Determining correct pre-processing pipeline for User Support dada2 , paired-end , cutadapt	2	1215	June 22, 2018
Demux error with pairend lectures User Support demux , paired-end , pipe-error	1	619	April 26, 2018
Training paired-end classifier User Support feature-classifier , paired-end	1	1059	April 6, 2018
Importing mixed datasets paired and unpaired FASTQs already cleaned up/QCd User Support import , paired-end	5	1950	April 5, 2018
Merging forward and reverse casava one eight User Support import , paired-end	1	1545	April 4, 2018
Diversity analysis needs metadata file for Casava 1.8 paired-end User Support diversity , paired-end	1	777	March 8, 2018
Miseq paired-end data with no barcodes User Support multiplexed , paired-end , cutadapt	11	3319	March 6, 2018
Importing paired end demultiplexed MiSeq data User Support import , pending-development , fastq-manifest , paired-end	20	9380	February 28, 2018
Qiime vsearch join-pairs error User Support paired-end , joining , vsearch	4	2509	February 23, 2018
Question about analyze paired-end data with Qiime2 User Support dada2 , paired-end	6	1839	February 15, 2018
Creating manifest file for fastq files that contain both forward and reverse reads User Support pending-development , fastq-manifest , paired-end , interleaved	2	1527	January 31, 2018
Analyzing paired end reads in QIIME 2 Tutorials tutorial , paired-end , joining	8	21495	January 11, 2018
DADA2 (2017-12) segfault, memory not mapped error User Support dada2 , paired-end	7	4012	January 5, 2018
Importing fastq.gz files (Cassava 1.8) User Support import , paired-end , fastq	17	9123	December 20, 2017
Quality filter paired end fastq's User Support quality-filter , paired-end , fastq	5	3589	December 22, 2017
Performance and running time of classify-consensus-blast+ User Support feature-classifier , taxonomy , paired-end	10	4881	December 22, 2017
Lost of data with dada2 User Support dada2 , paired-end	13	8993	December 22, 2017