# what is dada2 message mean

**URL:** https://forum.qiime2.org/t/what-is-dada2-message-mean/17734
**Category:** User Support
**Created:** [December 9, 2020, 12:58pm UTC](https://forum.qiime2.org/t/what-is-dada2-message-mean/17734 "2020-12-09T12:58:33Z")
**Posts on this page:** 3
**Page:** 1

<div class="post-metadata">

### Author: ![kimshinseung](https://forum.qiime2.org/letter_avatar_proxy/v4/letter/k/e274bd/32.png) [@kimshinseung](https://forum.qiime2.org/u/kimshinseung)
#### Post date: [December 9, 2020, 12:58pm UTC](https://forum.qiime2.org/t/what-is-dada2-message-mean/17734/1 "2020-12-09T12:58:33Z")

</div>

Hello

I am running 250 samples, and I get the following message from dada2.

1. Learning Error Rates

"267211440 total bases in 1113381 reads from 5 samples will be used for learning the error rates"

What does this mean?

Does that mean poor sequencing quality?

Thank you.

---

<div class="post-metadata">

### Author: ![cherman2](https://forum.qiime2.org/user_avatar/forum.qiime2.org/cherman2/32/17129_2.png) [@cherman2](https://forum.qiime2.org/u/cherman2)
#### Post date: [December 9, 2020, 8:09pm UTC](https://forum.qiime2.org/t/what-is-dada2-message-mean/17734/2 "2020-12-09T20:09:36Z")

</div>

Hello @kimshinseung,  
Getting this message when running dada2 is normal. Colin explains this really well in this post:

> [@Does learning error rates step of DAD2 have to have all samples under study?](https://forum.qiime2.org/t/does-learning-error-rates-step-of-dad2-have-to-have-all-samples-under-study/11356/8):
>
> Got it! Ok, I think everything is fine. Dada2 uses the first x samples (sorted) to build up the n-reads values and train the error models. Because errors are similar on each run, this is the default and should work well. You are good to go slight_smile Colin

what this message is saying is that dada2 is basically training your error models with 267211440 total bases in 1113381 reads from 5 samples.  
As long as you are getting an the correct output files from dada2 then you are golden 😄

Hope this helps!  
Chloe 🐢

---

<div class="post-metadata">

### Author: ![system](https://forum-qiime2-org.s3.dualstack.us-west-2.amazonaws.com/original/3X/2/1/21af5fe23cb6f4579467c66a9ed94e55274ca7bd.svg) [@system](https://forum.qiime2.org/u/system)
#### Post date: [January 10, 2021, 2:09am UTC](https://forum.qiime2.org/t/what-is-dada2-message-mean/17734/3 "2021-01-10T02:09:40Z")

</div>

This topic was automatically closed 31 days after the last reply. New replies are no longer allowed.
