Viewing Trimmed Sequence After DADA2

User Support
#1

Good day,

May I know if there is a way to view a chart showing the trimmed sequence after DADA2? Since the output from DADA2 are repseqs.qza, table.qza, and denoisingstats.qza, I am wondering if I can view the trimmed sequence so I can compare with the chart observed from the demux.qzv.

Thanks!

#2

Hello!
I am afraid. it is not possible in q2 - trimmed sequences are denoised and merged by the plugin.
But in theory one can run dada2 in R to check sequences after trimming.