I am a new Qiime 2 user. When analyzing joined reads (result from QIIME1 by running convert_fastaqual_fastq.py), I met some troubles. No error was reported. However, the results of feature table and rep-seqs seemed not right. Each feature was observed in one sample! It is unusual and I don’t know how to deal with it.
The screenshots are shown as fellows and data were attached.
It would be great if some help can be provided.
Thank you in advance.