# Taxaplots error
**URL:** https://forum.qiime2.org/t/taxaplots-error/27063
**Category:** User Support
**Tags:** taxonomy
**Created:** [July 13, 2023, 6:10pm UTC](https://forum.qiime2.org/t/taxaplots-error/27063 "2023-07-13T18:10:59Z")
**Posts on this page:** 12
**Page:** 1
### Author:  [@EugeniaSH](https://forum.qiime2.org/u/EugeniaSH)
#### Post date: [July 13, 2023, 6:10pm UTC](https://forum.qiime2.org/t/taxaplots-error/27063/1 "2023-07-13T18:10:59Z")
Hello I am using Qiime2-2022.11
I am getting a error in the taxaplot step:
This are the commands :
qiime taxa barplot
--i-table table\_.qza
--i-taxonomy taxonomy\_.qza
--m-metadata-file Metadatos\_.tsv
--o-visualization taxa-bar-plots\_.qzv
**Plugin error from taxa:**
**Feature IDs found in the table are missing from the taxonomy: {'e471b4d90051213a2f380260fc40378f', '6ae397141328fcc917b9a87aa5d548a3', '4c5b12e3825577cde8437df04f5536cc', 'c6d453157c99855d562c971b88788b3c', '6f61d8be1f0a019dc7e7a7ae07c54d08', '5169c226a333dcb12102eff6cd3ad818', '7fee385ad9598137793ac77c7e7c11b4', '043761376a7b4bbf5ed08e472972dd4f', '8ea54389c04fc34bcf3487220ad73af0', '950a9b08dd59529ce33fc4c92c45165b', 'c9a6fea22a7d3e590311fa5674ad44db', '1c7f2d2baa0b3c0e45c3423b4d62d091', 'b3b31167d7d79314b45e782a7939b17e', 'a70c70e204e3b5a7632b047988b6b1ef', 'a1d62669ba5f67dd079c2f7ff250f1fe', 'f66631894ca0b6bbfb15c71c0c6fde10', '** etc. etc.
I am not sure what to do.
Thanks
---
### Author:  [@colinvwood](https://forum.qiime2.org/u/colinvwood)
#### Post date: [July 13, 2023, 6:15pm UTC](https://forum.qiime2.org/t/taxaplots-error/27063/2 "2023-07-13T18:15:24Z")
Hello @EugeniaSH,
Please see [this](https://forum.qiime2.org/t/keeping-unassigned-sequences-in-the-barplot/26183) post, from a user with an identical problem.
Thanks.
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### Author:  [@EugeniaSH](https://forum.qiime2.org/u/EugeniaSH)
#### Post date: [July 13, 2023, 7:03pm UTC](https://forum.qiime2.org/t/taxaplots-error/27063/3 "2023-07-13T19:03:07Z")
Thank you
I will try it.
He uses Qiime2-2023 , and I am using 2-2022.11, would that be an issue?
I noticed several different steps in the pipeline, starting on step 7 : qiime feature-table filter-samples
Thanks
---
### Author:  [@colinvwood](https://forum.qiime2.org/u/colinvwood)
#### Post date: [July 13, 2023, 8:09pm UTC](https://forum.qiime2.org/t/taxaplots-error/27063/4 "2023-07-13T20:09:55Z")
Hello @EugeniaSH,
The version of qiime will almost certainly not be an issue. The post I linked wasn't meant to be a pipeline to follow, but rather contain an explanation of why/how your feature table and taxonomy became out of sync, which is the root of the issue here.
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### Author:  [@EugeniaSH](https://forum.qiime2.org/u/EugeniaSH)
#### Post date: [July 13, 2023, 11:08pm UTC](https://forum.qiime2.org/t/taxaplots-error/27063/5 "2023-07-13T23:08:19Z")
Thanks
However I am not sure how to fix it.
Any and all help will be greatly appreciated
Eugenia
---
### Author:  [@colinvwood](https://forum.qiime2.org/u/colinvwood)
#### Post date: [July 13, 2023, 11:46pm UTC](https://forum.qiime2.org/t/taxaplots-error/27063/6 "2023-07-13T23:46:05Z")
Hello @EugeniaSH,
What filtering have you applied to the sequences that made your taxonomy? You need to apply the same filtering to your feature table.
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### Author:  [@EugeniaSH](https://forum.qiime2.org/u/EugeniaSH)
#### Post date: [July 14, 2023, 4:05pm UTC](https://forum.qiime2.org/t/taxaplots-error/27063/7 "2023-07-14T16:05:44Z")
Thank you,
I am sorry for the novice questions, but I am not even sure that I filter.
This is my pipeline after import :
3- qiime dada2 denoise-paired
--i-demultiplexed-seqs imported\_seq.qza
--p-trunc-len-f 210
--p-trunc-len-r 210
--p-trim-left-f 0
--p-trim-left-r 0
--p-n-threads 0
--o-representative-sequences rep-seqs.qza
--o-table table.qza
--o-denoising-stats stats.qza
1. visualize
2. qiime feature-table summarize
--i-table table.qza
--o-visualization table.qzv
--m-sample-metadata-file Metadata.tsv
3. qiime feature-table tabulate-seqs
--i-data rep-seqs.qza
--o-visualization rep-seqs.qzv
4. qiime phylogeny align-to-tree-mafft-fasttree
--i-sequences rep-seqs.qza
--o-alignment aligned-rep-seq.qza
--o-masked-alignment masked-aligned-rep-seqs.qza
--o-tree unrooted-tree-qza
--o-rooted-tree rooted-tree.qza
5. diversity core metrics
6. alphararefraction
10 alpha diversity
7. taxonomy
qiime feature-classifier classify-sklearn
--i-classifier Classifier/classifier.qza
--i-reads Classifier/ref-seqs.qza
--o-classification taxonomy.qza
qiime metadata tabulate
--m-input-file taxonomy.qza
--o-visualization taxonomy.qzv
12 taxabar plots
qiime taxa barplot
--i-table table.qza
--i-taxonomy taxonomy.qza
--m-metadata-file Metadatos.tsv
--o-visualization taxa-bar-plots.qzv
THANK YOU
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### Author:  [@colinvwood](https://forum.qiime2.org/u/colinvwood)
#### Post date: [July 14, 2023, 7:38pm UTC](https://forum.qiime2.org/t/taxaplots-error/27063/8 "2023-07-14T19:38:00Z")
Hello @EugeniaSH,
You're classifying the reference-sequences in step 10. Although this will result in a very accurate classification 😀, this isn't what you want. You want to classify _your_ sequences, namely `rep-seqs.qza`, which came out of dada2.
Let us know if this makes sense.
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### Author:  [@EugeniaSH](https://forum.qiime2.org/u/EugeniaSH)
#### Post date: [July 14, 2023, 7:59pm UTC](https://forum.qiime2.org/t/taxaplots-error/27063/9 "2023-07-14T19:59:32Z")
Absolutely. Makes TOTAL SENSE!
Sorry for the trouble.
Eugenia
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### Author:  [@colinvwood](https://forum.qiime2.org/u/colinvwood)
#### Post date: [July 14, 2023, 8:02pm UTC](https://forum.qiime2.org/t/taxaplots-error/27063/10 "2023-07-14T20:02:21Z")
@EugeniaSH,
No need to apologize, this is what the forum is for. Let us know if the taxa bar plot works smoothly now.
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### Author:  [@EugeniaSH](https://forum.qiime2.org/u/EugeniaSH)
#### Post date: [July 14, 2023, 8:05pm UTC](https://forum.qiime2.org/t/taxaplots-error/27063/11 "2023-07-14T20:05:33Z")
perfectly.
Thanks again
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### Author:  [@system](https://forum.qiime2.org/u/system)
#### Post date: [August 15, 2023, 2:05am UTC](https://forum.qiime2.org/t/taxaplots-error/27063/12 "2023-08-15T02:05:53Z")
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