Hi I hope all are fine, 1 : I have this taxonomy bar plot (attached ) set on level 7 which is supposed to show species , for instance in the first line of legend there is Staphylococcaceae ( family : level 6 ) Staphlylocococcus (genus: level 7 ) ,It is not really up to species level … level 7 is …

[image] Fatemah: I opened the csv file in excel, too many zero (attached) it means no taxa has been assigned for , Should I filter all the zeros, I tried but it is not practical if I want to do plotting in excel ? filter using QIIME 2 with qiime feature-table filter-features, and then generat…

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Taxa bar plot and exporting

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