How does one split their table by, say, a variable in their metadata file? I’ve come across “qiime sample-classifier split-table” but it seems this is trying to making training and testing sets, and I just want a mini-tables.
You want to use
qiime feature-table filter-samples for each individual group you want to isolate.
Correct, that randomly splits a table. It does not split on a metadata category.
That worked! What took some digging was how to use the “–p-where.” I detail this below with information to be inserted in capital letters:
qiime feature-table filter-samples
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