Hi, @mortonjt !
I am studying q2-mmvec to analyze my data( metabolome and the microbiom). However, I meet some questions about input files.
Firstly, I have gained a table of microbe’s taxonomy via USEARCH, and there is not ‘confidence’ in this table(maybe I have ignored some details).But in sample data of mmvec(cf/taxonomy.txt) has ‘confidence’. Therefore, I wonder if the ‘confidence’ is necessary for mmvec ?
Secondly, my original data about metabolome mainly has sample ID, compounds’ name and different compounds abundances in different samples, and I have poorly understood how to gain metabolite-metadata in sample data of mmvec (‘cf/metabolite-metadata.txt’). In other words, I don’t know what information metabolite-metadata needs and how to let my data of metabolome convert this format, probably I have ignored some steps.
Looking forward to your reply. Thank you!