Qimme2 generated taxa not existing in original input taxonomy

User Support
#1

Hi, I used Qimme2 with silva_132 and output the raw count of each level by viewing taxa_barplot.qzv.
qiime taxa barplot
–i-table denoise_table.qza
–i-taxonomy denoised-seqs-with-taxa.qza
–m-metadata-file sample-metadata.txt
–o-visualization taxa_barplot.qzv

But, inside the levelX.csv files, there are taxa look like:
D_0__Bacteria...__
D_0__Bacteria.D_1__Proteobacteria.D_2__Gammaproteobacteria.D_3__Betaproteobacteriales.D_4__Burkholderiaceae.D_5__Parasutterella.__

I did not find any these taxa in my original silva_132 taxonomy. How Qimme2 generated these taxa? How should I do with them? Thanks!!!

#2
#3

I search the forum but cannot find the answer out. Would you please tell me where can I find the similar posters?

#4

Found similar posters. Thanks

1 Like
#5
#6

Hi, @lipeipei! Welcome to the forum :smile:

It sounds like you might have found what you’re looking for. If so, would you mind sharing the answer to your question here?

:v:,
Andrew

1 Like
#7

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