Qiime2 in Jupyter

(Mirjana) #1

How can I use qiime2 (installed via docker) in Jupyter?

(Matthew Ryan Dillon) #2

(Matthew Ryan Dillon) #3

This is a great question, and one that I would like to try and write up a Community Tutorial for in the next week or so, so please stay tuned. Using Jupyter in a native installation is straightforward (activate your env and run jupyter notebook), but in Docker things are a bit more complicated. :telescope:

(Matthew Ryan Dillon) #4