QIIME2: An error was encountered while running DADA2 in R (return code 1)

Hello everyone!

I'm currently trying to run dada2 denoise-paired. However, it results in the following error:

"Plugin error from dada2:
An error was encountered while running DADA2 in R (return code 1), please inspect stdout and stderr to learn more."

Anyone has a clue about how to resolve this?

Hi @eduseb,

Welcome to the :qiime2: forum!

Can you please share the entire command you tried running? Along with the version of QIIME 2 you are using and how it is installed?

Additionally, please re-run your command and include the --verbose flag, and then copy/paste the full output for us to examine. This will provide us with the full error traceback so that we can identify where the issue is coming from. Thanks! :lizard:

Hello, I tried running everything again and the error disappeared. Thanks for answering!

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