qiime1 to qiime2 transition

qiime info
System versions
Python version: 3.6.7
QIIME 2 release: 2019.7
QIIME 2 version: 2019.7.0
q2cli version: 2019.7.0

Installed plugins
No plugins are currently installed.
You can browse the official QIIME 2 plugins at https://qiime2.org

Application config directory
/lustre1/ctgb-usr/local/miniconda3/envs/qiime2/var/q2cli

Getting help
To get help with QIIME 2, visit https://qiime2.org

I, I’m trying to start importing into qiime2 starting from fasta sequences I have produced with qiime1, I have the following problem:
qiime tools import
–input-path seqs.fna
–output-path sequences.qza
–type ‘FeatureData[Sequence]’

and I receive the following error

TypeError: Semantic type FeatureData[Sequence] does not have a compatible directory format.

An unexpected error has occurred:

Semantic type FeatureData[Sequence] does not have a compatible directory format.

See above for debug info.

Could you help me to solve?
I’m running on a linux cluster

Michela

Hi @MichelaRiba!

That is the problem right there - you need plugins in order to do anything with QIIME 2. It is pretty strange that you don’t have any plugins, can you comment on how QIIME 2 was installed on your cluster?

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Thanks a lot, that installation has been done by the System administrator, I have just forwarded your suggestion to him, meanwhile could be I would do on my Mac, I will update you hoping we solve! Thanks a lot

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