q2-SCNIC install error

Community Plugin Support
1

Hello,
I use Qiim2 Virtual version 2018.8 and tried to install q2-SCNIC follow the q2-SCNIC: Community Tutorial but I got the issue as show below. What is the problem?

[email protected]:~$ conda install -c lozuponelab q2-SCNIC
Solving environment: failed

PackagesNotFoundError: The following packages are not available from current channels:

  • q2-scnic
  • scnic[version='>=0.5.3']

Current channels:

To search for alternate channels that may provide the conda package you're
looking for, navigate to

https://anaconda.org

and use the search bar at the top of the page.

2

Hello Kanjana,

Thank you for posting the command you ran. I notice that many parts are older. Out-of-date code may not run well, or it may not run at all.

The current way to install SCNIC and q2-scnic: GitHub - lozuponelab/q2-SCNIC: A QIIME2 plugin for running SCNIC
The current release of Qiime2: Installing QIIME 2 — QIIME 2 2023.2.0 documentation

Let me know if that helps!

3

According to your advise, the SCNIC was successful installation.
Thank you so much.

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