I use the following command as in the export tutorial:
qiime tools export
feature-table.qza
–output-dir exported-feature-table
it produced the .biom feature table. But when I try to validate biom it say not a valid biom format
I use the following command as in the export tutorial:
qiime tools export
feature-table.qza
–output-dir exported-feature-table
it produced the .biom feature table. But when I try to validate biom it say not a valid biom format
Hi @Nourhan_sahly!
That is more or less expected. If you add --detailed-report
to the biom validate-table
command you’ll see it’s valid with the exception of the type
field. See this thread for more details.
Hope that helps!
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