Problem with importing single end files

User Support
1

Hello,

I want to analyze microbiome data and, at import moment, I cannot solve the error that appears:

There was a problem importing /home/talita/exp15/manifest:

Missing one or more files for SingleLanePerSampleSingleEndFastqDirFmt: '.+_.+_L[0-9][0-9][0-9]_R[12]_001\.fastq\.gz'

I've already tried to find any answer in the forum but without success.

Obs: talita is the user name; exp15 is the folders name; I have single end fastq unzipped data.

I appreciate for any help

Best regards,
Andre

2

@amorimc,

Can you copy and paste the command you used to attempt to import your files here? And your manifest file too? It looks like QIIME 2 is having trouble finding your files, so the output of an ls command on the directory you are trying to run import from might be helpful too :slightly_smiling_face:

3

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