I got this error when I tried to convert biom file to OTU. I didn’t have this issue while working with less samples but I increased the sample number and the issue arose. I used the following code:
biom convert -i samples_10000_frequency_filtered.biom -o samples_10000_frequency_filtered.txt --to-tsv
I attached a picture of the error I got. It says “OSError: [Errno 22} Invalid argument”.
Could you guys help me with this?