Hi, good day!
I was trying to do sequence quality control on the joined reads (using q2-vsearch).
The QIIME2 version I’m using is 2019.10
Below is the script i use:
qiime quality-filter q-score-joined
–p-min-quality 20 \
These are the errors I received:
There were some problems with the command:
(1/3) Missing option “–o-filtered-sequences”. ("–output-dir" may also be
(2/3) Missing option “–o-filter-stats”. ("–output-dir" may also be used)
(3/3) Got unexpected extra argument ( )
/var/spool/slurmd/job04754/slurm_script: line 22: --o-filtered-sequences: command not found
Can anyone point me in a right direction? Thank you in advance!