Hi,
I have filtered the table.qza and then using it for ancom analysis, but it shows some error: I will be thankful for your help.
command:
qiime composition ancom --i-table soil-c10-mins2-table.qza --m-metadata-file metadata3.tsv --m-metadata-column Treatment --o-visualization ancom-Soil.treatment.qzv --verbose
error:
Traceback (most recent call last):
File “/opt/gridware/pkg/el6/apps/qiime/2018.11.0/bin/lib/python3.5/site-packages/q2cli/commands.py”, line 274, in call
results = action(**arguments)
File “<decorator-gen-451>”, line 2, in ancom
File “/opt/gridware/pkg/el6/apps/qiime/2018.11.0/bin/lib/python3.5/site-packages/qiime2/sdk/action.py”, line 199, in bound_callable
self.signature.check_types(**user_input)
File “/opt/gridware/pkg/el6/apps/qiime/2018.11.0/bin/lib/python3.5/site-packages/qiime2/core/type/signature.py”, line 301, in check_types
name, kwargs[name].type, spec.qiime_type))
TypeError: Parameter ‘table’ received an argument of type FeatureTable[Frequency]. An argument of subtype FeatureTable[Composition] is required.
Plugin error from composition:
Parameter ‘table’ received an argument of type FeatureTable[Frequency]. An argument of subtype FeatureTable[Composition] is required.
See above for debug info.