I am using mock community to evaluate our pipeline, I got a plugin error and have been searched for the same problem on the forum but I didn't find any one have a similar error.
For this, I have created an artifact for the observed mock( I filtered them from DADA2 feature table collapsed the features by level 7 and convert it to a [RelativeFrequency]) and download the expected composition. Here is my command:
qiime taxa collapse --i-table mock-observed.qza --i-taxonomy taxonomy.qza --p-level 7 --o-collapsed-table mock-table.qza
qiime feature-table relative-frequency --i-table mock-table.qza --o-relative-frequency-table mock-relative.qza
qiime quality-control evaluate-composition --i-expected-features qc-mock-3-expected.qza --i-observed-features mock-relative.qza --o-visualization qc-mock-3-comparison.qzv
I got the following error:
Plugin error from quality-control:
"None of [Index(['MOCK'], dtype='object')] are in the [index]"
Debug info has been saved to /tmp/qiime2-q2cli-err-csbdgkbr.log
Did I use the wrong mock community( I am targeting 16rRNA V3V4)? if yes, I didn't know much about my mock samples except the taxonomic composition report and the file name (Taxonomy File:|gg_13_5_species_32bp.dat)
I have attached the observed and the expected composition artifact files
Any one has insight on this?