When I try to do Taxonomy classifiers using Greengenes 13_8 99% OTUs I get the following comment:
“Plugin error from feature-classifier:
The scikit-learn version (0.23.1) used to generate this artifact does not match the current version of scikit-learn installed (0.23.2). Please retrain your classifier for your current deployment to prevent data-corruption errors.
Debug info has been saved to /tmp/qiime2-q2cli-err-xki1evve.log”
I didn’t find a database for version 0.23.2. What can I do?
Hi @Hila_t!
Did you install some other plugins or tools in your QIIME 2 environment? QIIME 2 2020.11 ships with scikit-learn 0.23.1 (which is why the classifiers are trained with that version) - if you don't have that version of skl installed it might be because you have installed or updated some other tools in the environment. If you create a new QIIME 2 env, following the installation instructions at docs.qiime2.org, you should be all set to use the 0.23.1 classifiers there.
Keep us posted!
This topic was automatically closed 31 days after the last reply. New replies are no longer allowed.