QIIME 2 2017.12 is now out, and it includes the ability to now optionally filter sequences using a feature-table (this is id-based filtering) - this significantly streamlines the steps @Nicholas_Bokulich illustrated above!
QIIME 2 2017.12 is now out, and it includes the ability to now optionally filter sequences using a feature-table (this is id-based filtering) - this significantly streamlines the steps @Nicholas_Bokulich illustrated above!