(Thank you for developer that I can analyze microbial composition.)
I’d like to normalize my biom file (or table.qza imported from biom file to QIIME2).
When I use QIIME1, I usually typed single_rarefaction.py to normalize for the lowest sample depth without additional file.
But in QIIME2, I can’t find normalizing protocol the same as QIIME1.
Actually, there is “qiime diversity core-metrics-phylogenetic” that gives me normalized .qza file. But I have to prepare phylogeny tree file…
I just want to normalize my “OTU table” without any other files.
Some one help me, please.