HI @lizgehret,
I have deactivated conda
and reinstalled QIIME2. Here's what I get:
qiime info
returns
System versions
Python version: 3.9.19
QIIME 2 release: 2024.5
QIIME 2 version: 2024.5.0
q2cli version: 2024.5.0
Installed plugins
alignment: 2024.5.0
composition: 2024.5.0
cutadapt: 2024.5.0
dada2: 2024.5.0
deblur: 2024.5.0
demux: 2024.5.0
diversity: 2024.5.0
diversity-lib: 2024.5.0
emperor: 2024.5.0
empress: 1.2.0
feature-classifier: 2024.5.0
feature-table: 2024.5.0
fragment-insertion: 2024.5.0
longitudinal: 2024.5.0
metadata: 2024.5.0
phylogeny: 2024.5.0
quality-control: 2024.5.0
quality-filter: 2024.5.0
rescript: 2024.5.0
sample-classifier: 2024.5.0
taxa: 2024.5.0
types: 2024.5.0
vsearch: 2024.5.0
Application config directory
/Users/phamnguyenhoangle/miniconda3/envs/qiime2-amplicon-2024.5/var/q2cli
Getting help
To get help with QIIME 2, visit https://qiime2.org
and
conda list scikit-bio
returns
# packages in environment at /Users/miniconda3/envs/qiime2-amplicon-2024.5:
#
# Name Version Build Channel
scikit-bio 0.6.0 py39h5b4affa_4 conda-forge
However, the channel list is still the same:
channels:
- r
- bioconda
- conda-forge
- defaults
I will try to run the Moving Picture tutorial again and let you know if I encounter any problem. Thanks a lot~!