My labmate @Lauren and I are trying to find an easier way to compile DADA2 denoising stats from many different DADA2 outputs. Is there any QIIME2 command available to merge denoising stats, similar to how one can merge feature tables and rep seqs? We tried using
qiime metadata tabulate to merge the
denoising-stats.qza files, but this did not work. It seemed to not like it because all of the columns are the same, and it basically wants to append new columns together.
The only other way we have thought to do this is to export the
stats.tsv files from each of the qza files and then compile them in one large excel file, but this is a bit cumbersome.
Thanks in advance!
Carli and Lauren