mafft: non-zero exit status 1 error

Hello @Manny,

Can you please rerun your commands with the --verbose flag? That way we can get a more detailed error message to work from.

Also, If you search the forum you will find that this error has been encountered and resolved before.

This post suggests that the error could be a memory issue.

Once you get the full error message posted here we can see what the problem is and resolve it from there.

-Hannah