I am having some difficulty training the the feature classifier on the UNITE database (I think it’s related to not having enough RAM). I was wondering if anyone might be able to share a trained classifier using a relatively recent version of the dynamic UNITE database. Would be much appreciated!
Do you want a classifier with all fungi? or all euks? 97%, 99%, or dynamic clustering threshold?
All recent UNITE releases contain multiple versions… and the fungi-only version is a lot smaller (meaning less memory and time required to train a classifier).
So if you only want fungi, you might be able to train the fungal database on your own. Otherwise, I do have some pre-trained classifiers I could share, but you will need to tell me exactly what version you want!
I need the dynamic classifier because I get the same error even though I have enough space and I don’t know how to solve it
Welcome to the forum, @Nohemi_G_Cortes_L!
Sorry, I don’t have the dynamic classifiers
Do you want to open a new issue to get support for that issue?
See also my advice above about reducing memory needs with UNITE:
Hey thanks for the responses yall. I did end up successfully training a classifier on the dynamic UNITE database. I just had to increase the RAM allocation on my VM up to 14 gb - really slowed down my computer!
@Nohemi_G_Cortes_L Let me know if would like me to share the dynamic classifier with you
This topic was automatically closed 31 days after the last reply. New replies are no longer allowed.