However, I have some problems how to read my sequencing output in QIIME2. After processing my datasets with a special analysis pipline (which is described to be an implementation of the UPRASE algorithm form the USEARCH8 package), I get the following output:
But I don’t understand how to go on with the downstream analysis on QIIME2. I read through all the tutorials on QIIME2docs but it is not really described how to go on with the normalization, alpha- und beta-diversity-analysis.
I would be very glad, if someone could help me out!