Hi Colin,
Luckily I was able to (slowly!) obtain the un-joined files. Thank you! Now I am working on importing them!
Unfortunately I am getting an error!
An unexpected error has occurred:
Forward and reverse reads must be provided exactly one time each for each sample. The following samples had forward but not reverse read fastq files: Sample1_R1
And then it lists what looks like all of them. However when I search for some of the samples that are listed as only having forward reads within my manifest, they are there and have reverse reads as well. So I'm confused as to how to proceed.
Please advise! If possible it is fairly urgent.
Thank you so much I sincerely appreciate that you offer this forum for help.