I am new for qiime2. I am trying to import my Illumina data. The company sent me two types of files for each treatment: forward and reverse fastaq.gz and merged file, also fastaq.gz. According to the company, demultiplexing has already been done.
The “look” of forward file is:
I have prepared a manifest with sample-id, forward-absolute-path, reserve-absolute-path, and followed the tutorial example:
qiime tools import
–output-path reads.qza \
Am I selecting the wrong type of data? Please help!