# I have a problem with install qiime2 on M1 mac using miniconda3

**URL:** https://forum.qiime2.org/t/i-have-a-problem-with-install-qiime2-on-m1-mac-using-miniconda3/22710
**Category:** Technical Support
**Created:** [April 7, 2022, 6:55am UTC](https://forum.qiime2.org/t/i-have-a-problem-with-install-qiime2-on-m1-mac-using-miniconda3/22710 "2022-04-07T06:55:20Z")
**Posts on this page:** 11
**Page:** 1

<div class="post-metadata">

### Author: ![Juneyoung\_Lee](https://forum.qiime2.org/user_avatar/forum.qiime2.org/juneyoung_lee/32/13223_2.png) [@Juneyoung\_Lee](https://forum.qiime2.org/u/Juneyoung_Lee)
#### Post date: [April 7, 2022, 6:55am UTC](https://forum.qiime2.org/t/i-have-a-problem-with-install-qiime2-on-m1-mac-using-miniconda3/22710/1 "2022-04-07T06:55:20Z")

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Hello. I am Juneyoung from South Korea.

I try to install qiime2 2022.2 version on my M1 macbook.  
But I have some error message from the terminal.

- Here is the message from the terminal.  
(base) juneyoung@Juneyoungui-MacBookAir ~ % conda env create -n qiime2-2022.2 --file qiime2-2022.2-py38-osx-conda.yml  
Collecting package metadata (repodata.json): done  
Solving environment: failed

ResolvePackageNotFound:

- q2-types=2022.2.0
- gfortran\_osx-64=9.3.0
- blast=2.12.0
- r-rcurl=1.98\_1.6
- q2templates=2022.2.0
- scikit-bio=0.5.6
- gfortran\_impl\_osx-64=9.3.0
- q2-feature-table=2022.2.0
- bowtie2=2.4.5
- bioconductor-iranges=2.28.0
- fasttree=2.1.10
- q2-feature-classifier=2022.2.0
- bioconductor-zlibbioc=1.40.0
- pbzip2=1.1.13
- perl-compress-raw-zlib=2.101
- bioconductor-rsamtools=2.10.0
- perl-json-xs=2.34
- q2-mystery-stew=2022.2.0
- q2-deblur=2022.2.0
- perl-encode=3.16
- q2-metadata=2022.2.0
- mafft=7.490
- qiime2=2022.2.0
- raxml=8.2.12
- perl-pathtools=3.75
- cutadapt=3.5
- q2-diversity-lib=2022.2.0
- vsearch=2.7.0
- bioconductor-genomicranges=1.46.0
- q2-alignment=2022.2.0
- q2-taxa=2022.2.0
- q2-quality-control=2022.2.0
- q2-emperor=2022.2.0
- q2-composition=2022.2.0
- sepp=4.3.10
- r-jpeg=0.1\_9
- q2galaxy=2022.2.0
- perl-compress-raw-bzip2=2.101
- sortmerna=2.0
- libgfortran5=9.3.0
- perl-scalar-list-utils=1.61
- bioconductor-shortread=1.52.0
- q2-vsearch=2022.2.0
- bioconductor-rhtslib=1.26.0
- python-isal=0.11.1
- pandoc=2.17.1.1
- bioconductor-s4vectors=0.32.0
- bioconductor-xvector=0.34.0
- q2-quality-filter=2022.2.0
- iqtree=2.2.0\_beta
- bioconductor-biostrings=2.62.0
- q2-sample-classifier=2022.2.0
- q2-demux=2022.2.0
- bioconductor-delayedarray=0.20.0
- q2-cutadapt=2022.2.0
- q2-fragment-insertion=2022.2.0
- bioconductor-dada2=1.22.0
- q2-diversity=2022.2.0
- xopen=1.4.0
- r-rcppparallel=5.1.5
- q2-phylogeny=2022.2.0
- isa-l=2.30.0
- emperor=1.0.3
- unifrac=0.20.3
- htslib=1.14
- q2cli=2022.2.0
- dnaio=0.7.1
- samtools=1.14
- perl-list-moreutils-xs=0.430
- hmmer=3.1b2
- bioconductor-biocparallel=1.28.0
- bioconductor-genomicalignments=1.30.0
- perl-io-compress=2.102
- q2-gneiss=2022.2.0
- q2-longitudinal=2022.2.0
- r-bitops=1.0\_7
- bioconductor-biobase=2.54.0
- entrez-direct=16.2
- biom-format=2.1.10
- r-vegan=2.5\_7
- libimagequant=2.17.0
- q2-dada2=2022.2.0
- libgcc=4.8.5

(base) juneyoung@Juneyoungui-MacBookAir ~ %

- My conda info is this.  
(base) juneyoung@Juneyoungui-MacBookAir ~ % conda info

I deleted the miniconda3 three times and repeat again on [Natively installing QIIME 2 — QIIME 2 2022.2.0 documentation](https://docs.qiime2.org/2022.2/install/native/)

Can you help me for installing the qiime2 on my mac?

---

<div class="post-metadata">

### Author: ![Juneyoung\_Lee](https://forum.qiime2.org/user_avatar/forum.qiime2.org/juneyoung_lee/32/13223_2.png) [@Juneyoung\_Lee](https://forum.qiime2.org/u/Juneyoung_Lee)
#### Post date: [April 7, 2022, 1:06pm UTC](https://forum.qiime2.org/t/i-have-a-problem-with-install-qiime2-on-m1-mac-using-miniconda3/22710/3 "2022-04-07T13:06:30Z")

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Also, I am trying to this post ([Install QIIME2 on Macbook Pro 2021 with apple M1 Chip](https://forum.qiime2.org/t/install-qiime2-on-macbook-pro-2021-with-apple-m1-chip/21492))

(base) juneyoung@Juneyoungui-MacBookAir ~ % CONDA\_SUBDIR=osx-64 conda env create -n qiime2-2022.2 --file qiime2-2022.2-py38-osx-conda.yml

Collecting package metadata (repodata.json): done

Solving environment: -

Found conflicts! Looking for incompatible packages.

This can take several minutes. Press CTRL-C to abort.

---

<div class="post-metadata">

### Author: ![SoilRotifer](https://forum.qiime2.org/user_avatar/forum.qiime2.org/soilrotifer/32/21071_2.png) [@SoilRotifer](https://forum.qiime2.org/u/SoilRotifer)
#### Post date: [April 7, 2022, 1:14pm UTC](https://forum.qiime2.org/t/i-have-a-problem-with-install-qiime2-on-m1-mac-using-miniconda3/22710/4 "2022-04-07T13:14:40Z")

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Hi @Juneyoung_Lee, welcome to :qiime2:!

In order to install and run conda & QIIME on an M1 mac you need to select the Terminal application, then press Command-I, to bring up the Terminal application information window. Check the box "Open using Rosetta". Then close / restart the Terminal app if needed.

Then install the regular version of OS X conda, _not_ the M1 version. then everything should work as expected. At least this is all I needed to do to get it working on my laptop.

-Mike

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<div class="post-metadata">

### Author: ![jconoranderson86](https://forum.qiime2.org/user_avatar/forum.qiime2.org/jconoranderson86/32/13228_2.png) [@jconoranderson86](https://forum.qiime2.org/u/jconoranderson86)
#### Post date: [April 7, 2022, 6:52pm UTC](https://forum.qiime2.org/t/i-have-a-problem-with-install-qiime2-on-m1-mac-using-miniconda3/22710/5 "2022-04-07T18:52:51Z")

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@SoilRotifer I'm getting the same issue though on a 2019 Mac Pro with the Intel processor. I am using my (updated) existing anaconda build. Is that likely to cause a problem?

---

<div class="post-metadata">

### Author: ![SoilRotifer](https://forum.qiime2.org/user_avatar/forum.qiime2.org/soilrotifer/32/21071_2.png) [@SoilRotifer](https://forum.qiime2.org/u/SoilRotifer)
#### Post date: [April 7, 2022, 7:12pm UTC](https://forum.qiime2.org/t/i-have-a-problem-with-install-qiime2-on-m1-mac-using-miniconda3/22710/6 "2022-04-07T19:12:04Z")

</div>

Hard to say unless I can see the error messages. If you are seeing `osx-arm64` or something similar in your error messages, then you've simply installed the wrong version of conda.

---

<div class="post-metadata">

### Author: ![Juneyoung\_Lee](https://forum.qiime2.org/user_avatar/forum.qiime2.org/juneyoung_lee/32/13223_2.png) [@Juneyoung\_Lee](https://forum.qiime2.org/u/Juneyoung_Lee)
#### Post date: [April 8, 2022, 12:20pm UTC](https://forum.qiime2.org/t/i-have-a-problem-with-install-qiime2-on-m1-mac-using-miniconda3/22710/7 "2022-04-08T12:20:11Z")

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(base) juneyoung@Juneyoungui-MacBookAir ~ % conda info

```
 active environment : base
active env location : /Users/juneyoung/miniconda3
        shell level : 1
   user config file : /Users/juneyoung/.condarc

```

populated config files : /Users/juneyoung/.condarc  
conda version : 4.12.0  
conda-build version : 3.21.8  
python version : 3.9.12.final.0  
virtual packages : \_\_osx=12.3.1=0  
\_\_unix=0=0  
\_\_archspec=1=x86\_64  
base environment : /Users/juneyoung/miniconda3 (writable)  
conda av data dir : /Users/juneyoung/miniconda3/etc/conda  
conda av metadata url : None  
channel URLs : [conda-forge/osx-64](https://conda.anaconda.org/conda-forge/osx-64)  
[conda-forge/noarch](https://conda.anaconda.org/conda-forge/noarch)  
[bioconda/osx-64](https://conda.anaconda.org/bioconda/osx-64)  
[bioconda/noarch](https://conda.anaconda.org/bioconda/noarch)  
[main/osx-64](https://repo.anaconda.com/pkgs/main/osx-64)  
[main/noarch](https://repo.anaconda.com/pkgs/main/noarch)  
[r/osx-64](https://repo.anaconda.com/pkgs/r/osx-64)  
[r/noarch](https://repo.anaconda.com/pkgs/r/noarch)  
package cache : /Users/juneyoung/miniconda3/pkgs  
/Users/juneyoung/.conda/pkgs  
envs directories : /Users/juneyoung/miniconda3/envs  
/Users/juneyoung/.conda/envs  
platform : osx-64  
user-agent : conda/4.12.0 requests/2.27.1 CPython/3.9.12 Darwin/21.4.0 OSX/12.3.1  
UID:GID : 501:20  
netrc file : None  
offline mode : False

(base) juneyoung@Juneyoungui-MacBookAir ~ % conda env create -n qiime2-2022.2 --file qiime2-2022.2-py38-osx-conda.yml  
Collecting package metadata (repodata.json): done  
Solving environment: /  
Found conflicts! Looking for incompatible packages.  
This can take several minutes. Press CTRL-C to abort.

- failed

I did same way that you recommended!  
Conda osx is working on terminal with rosetta model! Thank you!  
However, qiime2 is not installed and the conflict issue is still repeated. Hm.. I don't know what is the problem.

---

<div class="post-metadata">

### Author: ![jconoranderson86](https://forum.qiime2.org/user_avatar/forum.qiime2.org/jconoranderson86/32/13228_2.png) [@jconoranderson86](https://forum.qiime2.org/u/jconoranderson86)
#### Post date: [April 8, 2022, 1:56pm UTC](https://forum.qiime2.org/t/i-have-a-problem-with-install-qiime2-on-m1-mac-using-miniconda3/22710/8 "2022-04-08T13:56:24Z")

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@SoilRotifer anaconda works great. I use it all the time, the error I'm getting is the same as Juneyoung.

"Collecting package metadata (repodata.json): done

Solving environment: -

Found conflicts! Looking for incompatible packages.

This can take several minutes. Press CTRL-C to abort."

What I was wondering was if there was any issue using the full anaconda installation as opposed to Miniconda?

---

<div class="post-metadata">

### Author: ![SoilRotifer](https://forum.qiime2.org/user_avatar/forum.qiime2.org/soilrotifer/32/21071_2.png) [@SoilRotifer](https://forum.qiime2.org/u/SoilRotifer)
#### Post date: [April 8, 2022, 4:09pm UTC](https://forum.qiime2.org/t/i-have-a-problem-with-install-qiime2-on-m1-mac-using-miniconda3/22710/10 "2022-04-08T16:09:04Z")

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Looks like your issues may be resolved over in this thread:

> [@Conflicts found when installing qiime2-2022.2 on MacOS 12.2.1](https://forum.qiime2.org/t/conflicts-found-when-installing-qiime2-2022-2-on-macos-12-2-1/22719):
>
> Getting error Found conflicts! Looking for incompatible packages. when trying to install QIIME2 2022.2 on MacOS 12.2.1. I see in forum posts ([https://forum.qiime2.org/t/instalation-qiime-2020-11-found-conflicts-looking-for-incompatible-packages/17757](https://forum.qiime2.org/t/instalation-qiime-2020-11-found-conflicts-looking-for-incompatible-packages/17757)) that for previous versions this has been addressed by the development team rebuilding the environment files: " Hey there @PatoUru & @cdiener - @ebolyen did some sleuthing and uncovered some package shuffling related to the r-base package - this a…

I suggest continuing the dialog over there.

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<div class="post-metadata">

### Author: ![Juneyoung\_Lee](https://forum.qiime2.org/user_avatar/forum.qiime2.org/juneyoung_lee/32/13223_2.png) [@Juneyoung\_Lee](https://forum.qiime2.org/u/Juneyoung_Lee)
#### Post date: [April 11, 2022, 5:12am UTC](https://forum.qiime2.org/t/i-have-a-problem-with-install-qiime2-on-m1-mac-using-miniconda3/22710/11 "2022-04-11T05:12:33Z")

</div>

Wow!

Thank you SoilRotifer!!  
It was successfully installed and worked well!  
I really appreciate you for helping me!

Have a great day!

---

<div class="post-metadata">

### Author: ![rogasan](https://forum.qiime2.org/user_avatar/forum.qiime2.org/rogasan/32/12382_2.png) [@rogasan](https://forum.qiime2.org/u/rogasan)
#### Post date: [April 15, 2022, 7:48am UTC](https://forum.qiime2.org/t/i-have-a-problem-with-install-qiime2-on-m1-mac-using-miniconda3/22710/12 "2022-04-15T07:48:17Z")

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With intel chip, install regular mini-anaconda or anaconda.  
If some issue arises, try the command line " conda env create -n qiime2-2022.2 --file..." some times more.  
It will works.

---

<div class="post-metadata">

### Author: ![system](https://forum-qiime2-org.s3.dualstack.us-west-2.amazonaws.com/original/3X/2/1/21af5fe23cb6f4579467c66a9ed94e55274ca7bd.svg) [@system](https://forum.qiime2.org/u/system)
#### Post date: [May 16, 2022, 1:48pm UTC](https://forum.qiime2.org/t/i-have-a-problem-with-install-qiime2-on-m1-mac-using-miniconda3/22710/13 "2022-05-16T13:48:28Z")

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