I need to merge two different taxonomy and sequence databases for functional gene. I did not find any command in Qiime2. Could you please tell me how to that in Qiime2 or another software?
What format will your data be in? I assume you will use QIIME 2 to import these data first - is that right? QIIME 2 has several ways of merging artifacts, so it will depend on what sort of artifacts you are working with.
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